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Influence of π-stacking on the N7 and O6 proton affinity of guanine

机译:π堆积对鸟嘌呤N7和O6质子亲和力的影响

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The influence of π-stacking interactions between guanine (G) and the side chain of tyrosine (Tyr) on the N7 and O6 proton affinities of guanine and on the capability of these sites to act as hydrogen bond acceptors is analyzed at the B3LYP-D, M05-2X and MP2 levels of theory. With all methods, results from full geometry optimizations indicate that stacking interactions increase the N7 and O6 proton affinities by about 5–6 kcal mol?1, the increase being slightly larger for N7. Consistently with these results, hydrogen bond distances between guanine and one water molecule decrease in the stacked system. Moreover, interaction energy between H2O and (G-Tyr) is found to be 2–3 kcal mol?1 larger than in G···H2O. This strengthening arises from the additional Tyr–H2O stabilizing interactions and from a cooperative interplay between stacking and hydrogen bond forces.
机译:在B3LYP-D上分析了鸟嘌呤(G)和酪氨酸侧链(Tyr)之间的π堆积相互作用对鸟嘌呤N7和O6质子亲和力以及这些位点作为氢键受体的能力的影响。 ,M05-2X和MP2的水平理论。所有方法的全部几何优化结果均表明,堆垛相互作用使N7和O6的质子亲和力增加了约5-6 kcal mol?1 ,对于N7而言,增加量稍大。与这些结果一致,鸟嘌呤和一个水分子之间的氢键距离在堆叠系统中减小。此外,发现H2O和(G-Tyr)之间的相互作用能比G···H2O中的大2–3 kcal mol?1 。这种增强来自附加的Tyr–H2 O稳定相互作用以及堆积和氢键力之间的相互作用。

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  • 来源
    《Theoretical Chemistry Accounts》 |2009年第2期|105-111|共7页
  • 作者单位

    Departament de Química Universitat Autònoma de Barcelona 08193 Bellaterra Spain;

    Departament de Química Universitat Autònoma de Barcelona 08193 Bellaterra Spain;

    Departament de Química Universitat Autònoma de Barcelona 08193 Bellaterra Spain;

    Departament de Química Universitat Autònoma de Barcelona 08193 Bellaterra Spain;

    Departament de Química Universitat Autònoma de Barcelona 08193 Bellaterra Spain;

    Departament de Química Universitat Autònoma de Barcelona 08193 Bellaterra Spain;

    Departament de Química Universitat Autònoma de Barcelona 08193 Bellaterra Spain;

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