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首页> 外文期刊>Theoretical Chemistry Accounts >Probing O-dealkylation and deamination aging processes in tabun-conjugated AChE: a computational study
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Probing O-dealkylation and deamination aging processes in tabun-conjugated AChE: a computational study

机译:探测禁忌共轭AChE中的O-脱烷基和脱氨基老化过程:计算研究

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The mechanisms of the aging process of tabun-conjugated acetylcholinesterase were explored using density functional theory calculations. The free energy surfaces were calculated for O-dealkylation (C–O bond breaking) and deamination (P–N bond breaking) pathways for the aging process of tabun-conjugated acetylcholinesterase as suggested by mass and crystallographic studies. Initially, the calculations were performed using tabun-conjugated serine (SUN) molecule. O-dealkylation mechanism proceeds via one-step SN2 type process, whereas the deamination process proceeds via two steps addition–elimination reaction at the phosphorus center of SUN molecule. The recent proposal of another deamination mechanism using human butyrylcholinesterase (hBChE) conjugated with N-mono methyl analogue of tabun (TA4) has also been explored (Nachon et al. in Chem Biol Interact 187:44–48, 2010). The rate-determining activation barrier calculated for this deamination mechanism (26.3 kcal/mol) was comparable with O-dealkylation process (26.9 kcal/mol) with B3LYP/6-31+G* level of theory. To examine the influence of catalytic residue His447, additional calculations were performed with imidazole group of His447 residue. The incorporation of imidazole group of catalytic residue His447 showed marked decrease in the free energies of activation for all the studied aging processes of tabun-inhibited serine. The aging mechanisms have been explored with TA4-inhibited serine, and calculated results showed that the deamination with the rearrangement process is markedly preferred in this case, which supports the Nachon et al. proposal based on the crystallographic studies.
机译:利用密度泛函理论计算探索了禁忌素结合的乙酰胆碱酯酶衰老的机理。根据质量和晶体学研究的建议,计算了禁忌结合的乙酰胆碱酯酶老化过程的O-脱烷基化(C–O键断裂)和脱氨化(P–N键断裂)途径的自由能表面。最初,计算是使用与Tabun共轭的丝氨酸(SUN)分子进行的。 O-脱烷基化机理是通过一步一步的SN 2型过程进行的,而脱氨基过程则是通过两步加成-消除SUN分子磷中心的反应来进行的。最近还研究了另一种使用人丁酰胆碱酯酶(hBChE)与塔宾的N-单甲基类似物(TA4)共轭的脱氨机理的提议(Nachon等人,Chem Biol Interact 187:44-48,2010)。根据理论上的B3LYP / 6-31 + G *水平,为此脱氨机理计算的决定速率的活化势垒(26.3 kcal / mol)与O-脱烷基化工艺(26.9 kcal / mol)相当。为了检查催化残基His447的影响,对His447残基的咪唑基团进行了其他计算。咪唑基催化残基His447的掺入显示了塔布抑制丝氨酸的所有老化过程中活化自由能的显着降低。用TA4抑制的丝氨酸探索了衰老机理,计算结果表明,在这种情况下,重排过程的脱氨作用是明显优选的,这支持了Nachon等。根据晶体学研究的建议。

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