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Changing the substrate specificity of P450cam towards diphenylmethane by semi-rational enzyme engineering

机译:通过半理性酶工程技术改变P450cam对二苯甲烷的底物特异性

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摘要

A focused library comprising nine residues of the active site of P450cam monooxygenase resulting in ∼300 000 protein variants was screened for activity on diphenylmethane (DPM). The assay was based on the depletion of NADH by an in vitro reconstituted P450cam system in a 96-well scale. The throughput was increased by the parallel cultivation, purification and analysis of 20 variants per well (cluster screening). Thus ∼20 000 protein variants could be screened in summary of which five were found to transform DPM with a specific activity of up to 75% of the wild-type activity on d-camphor and a coupling rate of 7–18%. One variant converting DPM to 4-hydroxydiphenylmethane (4HDPM) was subjected to site-directed mutagenesis and saturation mutagenesis, which revealed the particular importance of positions F87, Y96 and L244 for substrate selectivity and the possibility for further improvements of this variant. Moreover, a reduction in size of the amino acid at position 396 decreased specific activity dramatically but increased coupling and switched the main product formation from 4HDPM towards diphenylmethanol.
机译:筛选了一个集中的文库,该文库包含P450cam单加氧酶活性位点的9个残基,产生了约30万个蛋白质变体,对二苯甲烷(DPM)具有活性。该测定基于96孔规模的体外重构P450cam系统对NADH的消耗。通过平行培养,纯化和分析每孔20个变体(集群筛选),可以提高通量。因此,总共可以筛选出约20000种蛋白质变体,其中发现有5种可以转化DPM,其比活性高达d-樟脑的野生型活性的75%,偶联率达7-18%。将DPM转化为4-羟基二苯甲烷(4HDPM)的一种变体进行了定点诱变和饱和诱变,这揭示了位置F87,Y96和L244对于底物选择性特别重要,并且有可能进一步改进该变体。此外,位置396处氨基酸大小的减少显着降低了比活性,但增加了偶联,并使主要产物的形成从4HDPM转向了二苯甲醇。

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