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Sequence heuristics to encode phase behaviour in intrinsically disordered protein polymers

机译:编码内在无序蛋白聚合物中相行为的序列启发法

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摘要

Proteins and synthetic polymers that undergo aqueous phase transitions mediate self-assembly in nature and in man-made material systems. Yet little is known about how the phase behaviour of a protein is encoded in its amino acid sequence. Here, by synthesizing intrinsically disordered, repeat proteins to test motifs that we hypothesized would encode phase behaviour, we show that the proteins can be designed to exhibit tunable lower or upper critical solution temperature (LCST and UCST, respectively) transitions in physiological solutions. We also show that mutation of key residues at the repeat level abolishes phase behaviour or encodes an orthogonal transition. Furthermore, we provide heuristics to identify, at the proteome level, proteins that might exhibit phase behaviour and to design novel protein polymers consisting of biologically active peptide repeats that exhibit LCST or UCST transitions. These findings set the foundation for the prediction and encoding of phase behaviour at the sequence level.
机译:经历水相转变的蛋白质和合成聚合物在自然界和人造材料系统中介导自组装。关于蛋白质的相态如何在其氨基酸序列中进行编码,还知之甚少。在这里,通过合成内在无序的重复蛋白质来测试我们假设的编码相行为的基序,我们表明蛋白质可以被设计为在生理溶液中表现出可调的较低或较高的临界溶液温度(分别为LCST和UCST)。我们还表明,在重复水平上关键残基的突变消除了相行为或编码了正交转变。此外,我们提供了启发式方法,可以在蛋白质组水平上鉴定可能表现出相行为的蛋白质,并设计由表现出LCST或UCST转变的生物活性肽重复序列组成的新型蛋白质聚合物。这些发现为序列级的相位行为的预测和编码奠定了基础。

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  • 来源
    《Nature Materials》 |2015年第11期|1164-1171|共8页
  • 作者单位

    Department of Biomedical Engineering, Duke University, Durham, North Carolina 27708, USA ,Howard Hughes Medical Institute, Robin Chemers Neustein Laboratory of Mammalian Cell Biology and Development, The Rockefeller University, New York, New York 10065, USA;

    Department of Biomedical Engineering, Duke University, Durham, North Carolina 27708, USA;

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