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Bacterial, Archaeal and Fungal Succession in the Forefield of a Receding Glacier

机译:后退冰川前场的细菌,古细菌和真菌演替

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摘要

Glacier forefield chronosequences, initially composed of barren substrate after glacier retreat, are ideal locations to study primary microbial colonization and succession in a natural environment. We characterized the structure and composition of bacterial, archaeal and fungal communities in exposed rock substrates along the Damma glacier forefield in central Switzerland. Soil samples were taken along the forefield from sites ranging from fine granite sand devoid of vegetation near the glacier terminus to well-developed soils covered with vegetation. The microbial communities were studied with genetic profiling (T-RFLP) and sequencing of clone libraries. According to the T-RFLP profiles, bacteria showed a high Shannon diversity index (H) (ranging from 2.3 to 3.4) with no trend along the forefield. The major bacterial lineages were Proteobacteria, Actinobacteria, Acidobacteria, Firmicutes and Cyanobacteria. An interesting finding was that Euryarchaeota were predominantly colonizing young soils and Crenarchaeota mainly mature soils. Fungi shifted from an Ascomycota-dominated community in young soils to a more Basidiomycota-dominated community in old soils. Redundancy analysis indicated that base saturation, pH, soil C and N contents and plant coverage, all related to soil age, correlated with the microbial succession along the forefield.
机译:冰川前场的时间序列最初由冰川退缩后的贫瘠基质组成,是研究自然环境中主要微生物定殖和演替的理想场所。我们表征了瑞士中部达马冰川前场沿裸露的岩石底物中细菌,古细菌和真菌群落的结构和组成。沿前场采集了土壤样本,地点从冰川终点附近没有植被的细花岗岩砂到发达的植被覆盖土壤。微生物群落进行了基因分析(T-RFLP)和克隆文库的测序。根据T-RFLP谱,细菌表现出较高的香农多样性指数(H)(范围从2.3到3.4),并且沿前场没有趋势。主要细菌谱系是变形杆菌,放线菌,酸性杆菌,硬毛菌和蓝细菌。一个有趣的发现是,Euryarchaeota主要定居于年轻土壤,而Crenarchaeota主要定居于成熟土壤。真菌从年轻土壤中的以子囊菌为主的群落转变为旧土壤中的以担子菌为主的群落。冗余分析表明,碱饱和度,pH,土壤碳氮含量和植物覆盖率都与土壤年龄有关,与沿前田的微生物演替有关。

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  • 来源
    《Microbial Ecology》 |2012年第3期|p.552-564|共13页
  • 作者单位

    Forest Soils and Biogeochemistry, Swiss Federal Research Institute WSL, Zürcherstrasse 111, 8903, Birmensdorf, Switzerland;

    Forest Soils and Biogeochemistry, Swiss Federal Research Institute WSL, Zürcherstrasse 111, 8903, Birmensdorf, Switzerland;

    Institute for Integrative Biology, ETH Zürich, 8092, Zurich, Switzerland;

    Geological Institute, ETH Zürich, 8092, Zurich, Switzerland;

    Forest Soils and Biogeochemistry, Swiss Federal Research Institute WSL, Zürcherstrasse 111, 8903, Birmensdorf, Switzerland;

    Geological Institute, ETH Zürich, 8092, Zurich, Switzerland;

    Institute for Biogeochemistry and Pollution Dynamics, ETH Zürich, 8092, Zurich, Switzerland;

    Forest Soils and Biogeochemistry, Swiss Federal Research Institute WSL, Zürcherstrasse 111, 8903, Birmensdorf, Switzerland;

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