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Application of Badger's Rule to Heme and Non-Heme Iron-Oxygen Bonds: An Examination of Ferryl Protonation States

机译:ger法则在血红素和非血红素铁氧键上的应用:Ferryl质子化态的检验

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摘要

To gain insight into the protonation state of enzymatic ferryl species we have examined the applicability of Badger's rule to heme and non-heme iron-oxygen bonds.Using density functional theory we have calculated r_e and v_e for the Fe-O bonds of complexes with different axial ligands,iron-oxidation,oxygen-protonation,and spin states.Our results indicate that Badger's rule holds for heme and non-heme oxo and hydroxo complexes.We find that the long Fe-O bonds that have been reported in the crystal structures of the ferryl forms of myoglobin,horseradish peroxidase,cytochrome c peroxidase,and catalase deviate substantially from the values predicted by Badger's rule,while the short Fe-O bonds obtained from X-ray absorption measurements are in good agreement with Badger's rule.In light of our analysis we conclude that the ferryl forms of myoglobin,horseradish peroxidase,and cytochrome c peroxidase are authentic iron(IV)oxos with Fe-O bonds on the order of 1.66 A and pKa's < 4.
机译:为了了解酶促二茂铁物种的质子化状态,我们研究了Badger规则对血红素和非血红素铁氧键的适用性。使用密度泛函理论,我们计算了不同配合物的Fe-O键的r_e和v_e轴向配体,铁的氧化,氧的质子化和自旋态。我们的结果表明,Badger规则适用于血红素和非血红素的氧代和羟基配合物。我们发现在晶体结构中已经报道了长的Fe-O键铁蛋白形式的肌红蛋白,辣根过氧化物酶,细胞色素c过氧化物酶和过氧化氢酶的含量与Badger法则所预测的值大不相同,而从X射线吸收测量获得的短Fe-O键与Badger法则非常吻合。根据我们的分析,我们得出的结论是,肌红蛋白,辣根过氧化物酶和细胞色素C过氧化物酶的亚铁形式是带有Fe-O键的正铁(IV)氧代,数量级为1.66 A,pKa小于4。

著录项

  • 来源
    《Journal of the American Chemical Society》 |2006年第6期|p.1902-1906|共5页
  • 作者

    Michael T.Green;

  • 作者单位

    Contribution from the Department of Chemistry,The Pennsylvania State University,University Park,Pennsylvania 16802;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《生物学医学文摘》(MEDLINE);美国《化学文摘》(CA);
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 化学;
  • 关键词

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