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Modeling Yeast Cell Polarization Induced by Pheromone Gradients

机译:信息素梯度诱导的酵母细胞极化模型。

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摘要

Yeast cells respond to spatial gradients of mating pheromones by polarizing and projecting up the gradient toward the source. It is thought that they employ a spatial sensing mechanism in which the cell compares the concentration of pheromone at different points on the cell surface and determines the maximum point, where the projection forms. Here we constructed the first spatial mathematical model of the yeast pheromone response that describes the dynamics of the heterotrimeric and Cdc42p G-protein cycles, which are linked in a cascade. Two key performance objectives of this system are (1) amplification—converting a shallow external gradient of ligand to a steep internal gradient of protein components and (2) tracking—following changes in gradient direction. We used simulations to investigate amplification mechanisms that allow tracking. We identified specific strategies for regulating the spatial dynamics of the protein components (i.e. their changing location in the cell) that would enable the cell to achieve both objectives.
机译:酵母细胞通过极化并向着源向上投射梯度,从而响应交配信息素的空间梯度。认为它们采用了一种空间感测机制,其中细胞比较细胞表面上不同点的信息素浓度,并确定形成投影的最大点。在这里,我们构建了酵母信息素反应的第一个空间数学模型,该模型描述了异源三聚体和Cdc42p G蛋白循环的动力学,它们串联在一起。该系统的两个主要性能目标是(1)扩增-将配体的外部浅梯度转换为蛋白质成分的内部陡峭梯度;以及(2)跟踪-沿梯度方向变化。我们使用模拟来研究允许跟踪的扩增机制。我们确定了调节蛋白质成分的空间动力学(即它们在细胞中位置的变化)的特定策略,这些策略可使细胞实现两个目标。

著录项

  • 来源
    《Journal of Statistical Physics》 |2007年第2期|193-207|共15页
  • 作者单位

    Developmental ampamp Cell Biology Center for Complex Biological Systems University of California Irvine CA 92697 USA;

    Center for Mathematical and Computational Biology Center for Complex Biological Systems Department of Mathematics University of California Irvine CA 92697 USA;

    Center for Mathematical and Computational Biology Center for Complex Biological Systems Department of Mathematics University of California Irvine CA 92697 USA;

    Center for Mathematical and Computational Biology Center for Complex Biological Systems Department of Mathematics University of California Irvine CA 92697 USA;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    G-protein; polarization; gradient-sensing; spatial dynamics; surface diffusion;

    机译:G蛋白;极化;梯度传感;空间动力学;表面扩散;

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