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An Evaluation of Conventional Culture, invA PCR, and the Real-Time PCR iQ-Check Kit as Detection Tools for Salmonella in Naturally Contaminated Premarket and Retail Turkey

机译:评估常规培养,invA PCR和实时PCR iQ-Check试剂盒作为天然受污染的售前市场和零售土耳其中沙门氏菌的检测工具

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This study was aimed at comparing the ability of conventional culture, the iQ-Check real-time PCR kit, and invA PCR to detect Salmonella in naturally contaminated premarket and retail turkey parts. Premarket (n = 120) turkey parts collected from a commercial turkey processing plant, and retail turkey parts (n = 138) were examined. Both PCR methods detected a significantly greater (P < 0.05) number of positive samples when compared with the conventional culture method for the premarket turkey parts. The indices of total agreement between the conventional culture method and the iQ-Check kit for the premarket and retail parts were 79.2% (95% CI: 70.8, 86) and 90.6% (95% CI: 84.4, 94.9), respectively. When the conventional culture method was compared with invA PCR for Salmonella detection in the premarket and retail parts, the indices of total agreement were 75.8% (95% CI: 67.2, 83.2) and 84.1% (95% CI: 76.9, 89.7), respectively. The rates of false positives (premarket: 31.9%, retail: 9.7%) and false negatives (premarket: 5.9%, retail: 9.7%) were determined between the culture method and the iQ-Check kit. When invA PCR was compared with the culture method, the rates of false positives (premarket: 37.7%, retail: 11.1%) and false negatives (premarket: 5.9%, retail: 18.3%) were obtained. The higher total agreement and the lower rates of both false positives and false negatives for the iQ-Check kit compared with invA PCR for both premarket and retail turkey parts corroborates the use of the iQ-Check kit as a screening tool for Salmonella in poultry meat.
机译:这项研究旨在比较常规培养,iQ-Check实时PCR试剂盒和invA PCR检测天然受污染的上市前和零售火鸡部位沙门氏菌的能力。检查了从商用火鸡加工厂收集的售前火鸡零件(n = 120)和零售火鸡零件(n = 138)。与常规培养方法相比,这两种PCR方法都可以检测到大量的阳性样品(P <0.05)。常规培养方法与iQ-Check试剂盒在售前和零售零件中的总体一致性指数分别为79.2%(95%CI:70.8、86)和90.6%(95%CI:84.4、94.9)。当将常规培养方法与invA PCR进行比较之前和零售部分的沙门氏菌检测时,总协议指数分别为75.8%(95%CI:67.2,83.2)和84.1%(95%CI:76.9,89.7),分别。在培养方法和iQ-Check试剂盒之间确定误报率(售前市场:31.9%,零售:9.7%)和误报率(售前市场:5.9%,零售:9.7%)。将invA PCR与培养方法进行比较,得出假阳性率(上市前:37.7%,零售:11.1%)和假阴性率(上市前:5.9%,零售:18.3%)。与售前和零售土耳其零件的invA PCR相比,iQ-Check试剂盒的总协议更高,假阳性和假阴性的比率更低,这证实了将iQ-Check试剂盒用作禽肉沙门氏菌的筛选工具。

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