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An Active-Site Phenylalanine Directs Substrate Binding and C−H Cleavage in the α-Ketoglutarate-Dependent Dioxygenase TauD

机译:活性位苯丙氨酸指导α-酮戊二酸依赖性双加氧酶TauD中的底物结合和CH裂解。

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摘要

Abstract: Enzymes that cleave C H bonds are often found to depend on well-packed hydrophobic coresnthat influence the distance between the hydrogen donor and acceptor. Residue F159 in taurinen-ketoglutarate dioxygenase (TauD) is demonstrated to play an important role in the binding and orientationnof its substrate, which undergoes a hydrogen atom transfer to the active site Fe(IV)dO. Mutation of F159nto smaller hydrophobic side chains (L, V, A) leads to substantially reduced rates for substrate binding andnfor C H bond cleavage, as well as increased contribution of the chemical step to kcat under steady-statenturnover conditions. The greater sensitivity of these substrate-dependent processes to mutation at positionn159 than observed for the oxygen activation process supports a previous conclusion of modularity of functionnwithin the active site of TauD (McCusker, K. P.; Klinman, J. P. Proc. Natl. Acad. Sci. U.S.A. 2009, 106,n19791 19795). Extraction of intrinsic deuterium kinetic isotope effects (KIEs) using single turnover transientsnshows 2- to 4-fold increase in the size of the KIE for F159V in relation to wild-type and F159L. It appearsnthat there is a break in behavior following removal of a single methylene from the side chain of F159L tongenerate F159V, whereby the protein active site loses its ability to restore the internuclear distance betweennsubstrate and Fe(IV)dO that supports optimal hydrogenic wave function overlap.
机译:摘要:经常发现裂解C H键的酶依赖于堆积良好的疏水核,从而影响了氢供体与受体之间的距离。牛磺酸-酮戊二酸双加氧酶(TauD)中的残基F159被证明在其底物的结合和取向中起重要作用,底物经历氢原子转移到活性位Fe(IV)dO。 F159n突变为较小的疏水性侧链(L,V,A)导致底物结合和C H键裂解的速率大大降低,并且在稳态转化条件下化学步骤对kcat的贡献增加。这些底物依赖性过程对n159位突变的敏感性比氧活化过程更高,这证明了先前在TauD活性位点内功能模块的结论(McCusker,KP; Klinman,JP Proc.Natl.Acad.Sci.USA 2009,106,n19791 19795)。使用单个转换瞬变提取内在的氘动力学同位素效应(KIE)n显示相对于野生型和F159L,F159V的KIE大小增加了2到4倍。似乎从F159L tongeneate F159V的侧链上除去单个亚甲基后,行为发生了中断,从而蛋白质活性位点失去了恢复n底物与支持最佳氢波功能重叠的Fe(IV)dO的核间距离的能力。 。

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  • 来源
    《Journal of the American Chemical Society》 |2010年第14期|p.5114-5120|共7页
  • 作者单位

    Departments of Chemistry and Molecular and Cell Biology, and the California Institute forQuantitati e Biosciences, Uni ersity of California, Berkeley, California 94720;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《生物学医学文摘》(MEDLINE);美国《化学文摘》(CA);
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  • 正文语种 eng
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  • 入库时间 2022-08-18 00:50:13

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