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Computerized Classification of Prostate Cancer Gleason Scores from Whole Slide Images

机译:前列腺癌的计算机化分类Gleason从整个幻灯片图像中得分

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摘要

Histological Gleason grading of tumor patterns is one of the most powerful prognostic predictors in prostate cancer. However, manual analysis and grading performed by pathologists are typically subjective and time-consuming. In this paper, we present an automatic technique for Gleason grading of prostate cancer from H&E stained whole slide pathology images using a set of novel completed and statistical local binary pattern (CSLBP) descriptors. First, the technique divides the whole slide image (WSI) into a set of small image tiles, where salient tumor tiles with high nuclei densities are selected for analysis. The CSLBP texture features that encode pixel intensity variations from circularly surrounding neighborhoods are extracted from salient image tiles to characterize different Gleason patterns. Finally, the CSLBP texture features computed from all tiles are integrated and utilized by the multi-class support vector machine (SVM) that assigns patient slides with different Gleason scores such as 6, 7, or >= 8. Experiments have been performed on 312 different patient cases selected from the cancer genome atlas (TCGA) and have achieved superior performances over state-of-the-art texture descriptors and baseline methods including deep learning models for prostate cancer Gleason grading.
机译:肿瘤模式的组织学肠道分级是前列腺癌中最强大的预测性预测因子之一。然而,病理学家执行的手动分析和分级通常是主观和耗时的。在本文中,我们使用一组新颖的完成和统计局部二进制图案(CSLBP)描述符从H&E染色的H&E染色的前列腺癌的Glason分级的自动技术。首先,该技术将整个幻灯片图像(WSI)划分为一组小图像瓦片,其中选择具有高核密度的显着肿瘤瓦片进行分析。从突出图像瓦片中提取从循环周围邻域编码像素强度变化的CSLBP纹理特征,以表征不同的Gleason模式。最后,由所有瓦片计算的CSLBP纹理特征通过多级支持向量机(SVM)集成和使用,可分配具有不同Gleason评分的患者幻灯片,例如6,7或> = 8.实验已经在312执行选自癌症基因组Atlas(TCGA)的不同患者病例,并实现了最先进的纹理描述符和基线方法的优越性,包括前列腺癌GLEASIN分级的深层学习模型。

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