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Mutation and polymorphism spectrum in osteogenesis imperfecta type II: implications for genotype–phenotype relationships

机译:II型成骨不全症的突变和多态性谱:对基因型-表型关系的启示

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摘要

Osteogenesis imperfecta (OI), also known as brittle bone disease, is a clinically and genetically heterogeneous disorder primarily characterized by susceptibility to fracture. Although OI generally results from mutations in the type I collagen genes, COL1A1 and COL1A2, the relationship between genotype and phenotype is not yet well understood. To provide additional data for genotype–phenotype analyses and to determine the proportion of mutations in the type I collagen genes among subjects with lethal forms of OI, we sequenced the coding and exon-flanking regions of COL1A1 and COL1A2 in a cohort of 63 subjects with OI type II, the perinatal lethal form of the disease. We identified 61 distinct heterozygous mutations in type I collagen, including five non-synonymous rare variants of unknown significance, of which 43 had not been seen previously. In addition, we found 60 SNPs in COL1A1, of which 17 were not reported previously, and 82 in COL1A2, of which 18 are novel. In three samples without collagen mutations, we found inactivating mutations in CRTAP and LEPRE1, suggesting a frequency of these recessive mutations of ∼5% in OI type II. A computational model that predicts the outcome of substitutions for glycine within the triple helical domain of collagen α1(I) chains predicted lethality with ∼90% accuracy. The results contribute to the understanding of the etiology of OI by providing data to evaluate and refine current models relating genotype to phenotype and by providing an unbiased indication of the relative frequency of mutations in OI-associated genes.
机译:成骨不全症(OI),也称为脆性骨病,是一种临床和遗传异质性疾病,主要特征是容易骨折。尽管OI通常是由I型胶原基因COL1A1和COL1A2的突变引起的,但基因型和表型之间的关系尚未得到很好的了解。为了为基因型-表型分析提供更多数据,并确定具有致死性形式的OI的受试者中I型胶原基因突变的比例,我们对63名受试者中COL1A1和COL1A2的编码区和外显子侧翼区进行了测序II型OI,该疾病的围产期致死形式。我们在I型胶原蛋白中鉴定出61个不同的杂合突变,包括5个意义不明的非同义稀有变体,其中43个以前没有见过。另外,我们在COL1A1中发现了60个SNP,其中先前未报道过17个,在COL1A2中发现了82个,其中18个是新的。在三个没有胶原蛋白突变的样品中,我们发现CRTAP和LEPRE1中的失活突变,表明在II型OI中这些隐性突变的发生频率约为5%。预测胶原α1(I)链的三重螺旋域内甘氨酸替代结果的计算模型可预测致死率,准确度约为90%。通过提供数据以评估和完善有关基因型与表型的现有模型,以及通过提供OI相关基因突变的相对频率的无偏指示,这些结果有助于了解OI的病因。

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