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Quantitative analysis of adsorptive interactions of ionic and neutral pharmaceuticals and other chemicals with the surface of Escherichia coli cells in aquatic environment

机译:定量分析离子和中性药物及其他化学物质与水生环境中大肠杆菌细胞表面的吸附相互作用

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摘要

Since Escherichia coli is ubiquitous in nature and has been applied to biological, chemical, and environmental processes, molecular-level understanding of adsorptive interactions between chemicals and the bacterial surface is of great importance. To characterise the adsorption properties of the surface of E. coli cells in aquatic environment, the binding affinities (log K-d) of calibration compounds were experimentally measured, and then based on the values and numerically well-defined molecular interaction forces, i.e. linear free energy relationship (LFER) descriptors, a predictive model was developed. The examined substances are composed of cations, anions, and neutral compounds, and the used LFER descriptors are excess molar refraction (E), dipolarity/polarisability (S), H-bonding acidity (A) and basicity (B), McGowan volume (V), and coulombic interactions of cations (J(+)) and anions (J(-)). In experimental results, adsorption of anions on the bacterial surface was not observed, while cations exhibited high affinities. In case of neutral compounds, their low quantities were adsorbed, however whose affinities were mostly lower than those of cations. In a LFER study, it was shown that cationic interaction term has the best correlation in R-2 of 0.691 and sequential additions of S, A, and V help to increase the prediction accuracy. The LFER model (log K-d=-0.72-0.79 S + 0.81 A + 0.41 V + 0.85 J(+)) could predict the log K-d in R-2 of 0.871 and SE of 0.402 log unit, and then to check robustness and predictability of the model, we internally validated it by a leave-one-out cross validation (Q(LOO)(2)) study. As a result, the Q(LOO)(2) value was estimated to be 0.826, which was larger than standard of model acceptability (>0.5). (C) 2017 Elsevier Ltd. All rights reserved.
机译:由于大肠杆菌在自然界无处不在,并且已应用于生物,化学和环境过程,因此从分子水平上了解化学物质与细菌表面之间的吸附相互作用非常重要。为了表征在水生环境中大肠杆菌细胞表面的吸附特性,通过实验测量了校准化合物的结合亲和力(log Kd),然后根据这些值和数值上明确定义的分子相互作用力,即线性自由能关系(LFER)描述符,开发了预测模型。所检查的物质由阳离子,阴离子和中性化合物组成,使用的LFER描述子是过量摩尔折射(E),双极性/极化性(S),H键酸度(A)和碱度(B),McGowan体积( V),以及阳离子(J(+))和阴离子(J(-))的库仑相互作用。在实验结果中,未观察到阴离子在细菌表面的吸附,而阳离子则表现出高亲和力。在中性化合物的情况下,它们的吸附量很低,但是其亲和力大多低于阳离子。在LFER研究中,表明阳离子相互作用项在R-2中具有0.691的最佳相关性,并且顺序添加S,A和V有助于提高预测准确性。 LFER模型(log Kd = -0.72-0.79 S + 0.81 A + 0.41 V + 0.85 J(+))可以预测R-2中的log Kd为0.871,SE为0.402 log单位,然后检查鲁棒性和可预测性对于模型,我们通过留一法交叉验证(Q(LOO)(2))研究在内部对其进行了验证。结果,Q(LOO)(2)值估计为0.826,大于模型可接受性的标准(> 0.5)。 (C)2017 Elsevier Ltd.保留所有权利。

著录项

  • 来源
    《Environmental Pollution》 |2017年第8期|8-14|共7页
  • 作者单位

    Chonbuk Natl Univ, Sch Chem Engn, 567 Beakje Dearo, Jeonju 561756, Jeonbuk, South Korea;

    Chonbuk Natl Univ, Sch Chem Engn, 567 Beakje Dearo, Jeonju 561756, Jeonbuk, South Korea;

    Chonbuk Natl Univ, Sch Chem Engn, 567 Beakje Dearo, Jeonju 561756, Jeonbuk, South Korea;

    Chonbuk Natl Univ, Sch Chem Engn, 567 Beakje Dearo, Jeonju 561756, Jeonbuk, South Korea;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《生物学医学文摘》(MEDLINE);美国《化学文摘》(CA);
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    LFER; Adsorption; Molecular interaction; Escherichia coli; Prediction; Adsorption affinity;

    机译:LFER;吸附;分子相互作用;大肠杆菌;预测;吸附亲和力;

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