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首页> 外文期刊>Journal of computational biology >Machine-Learning Models for Multicenter Prostate Cancer Treatment Plans
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Machine-Learning Models for Multicenter Prostate Cancer Treatment Plans

机译:多中心前列腺癌症治疗计划的机器学习模型

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摘要

Clinical factors, including T-stage, Gleason score, and baseline prostate-specific antigen, are used to stratify patients with prostate cancer (PCa) into risk groups. This provides prognostic information for a heterogeneous disease such as PCa and guides treatment selection. In this article, we hypothesize that nonclinical factors may also impact treatment selection and their adherence to treatment guidelines. A total of 552 patients with intermediateand high-risk PCa treated with definitive radiation with or without androgen deprivation therapy (ADT) between 2010 and 2017 were identified from 34 medical centers within the Veterans Health Administration. Medical charts were manually reviewed, and details regarding each patient’s clinical history and treatment were extracted. Support Vector Machine and Random forest-based classification was used to identify clinical and nonclinical predictors of adherence to the treatment guidelines from the National Comprehensive Cancer Network (NCCN). We created models for predicting both initial treatment intent and treatment alterations. Our results demonstrate that besides clinical factors, the center in which the patient was treated (nonclinical factor) played a significant role in adherence to NCCN guidelines. Furthermore, the treatment center served as an important predictor to decide on whether or not to prescribe ADT; however, it was not associated with ADT duration and weakly associated with treatment alterations. Such center-bias motivates further investigation on details of center-specific barriers to both NCCN guideline adherence and on oncological outcomes. In addition, we demonstrate that publicly available data sets, for example, that from Surveillance, Epidemiology, and End Results (SEERs), may not be well equipped to build such predictive models on treatment plans.
机译:包括T-阶段,Gleason评分和基线前列腺特异性抗原的临床因素用于将前列腺癌(PCA)分析为风险群体。这为诸如PCA等异质疾病的预后信息提供了诸如PCA和指导治疗选择的预后信息。在本文中,我们假设非临床因素也可能影响治疗选择及其遵守治疗指南。在2010年至2017年间,共有552例患有明确辐射治疗的中间人高风险PCA的患者,从退伍军人卫生管理局内的34名医疗中心确定了来自2010年至2017年的雄激素剥夺治疗(ADT)。手动审查医疗图表,并提取了关于每个患者的临床病史和治疗的细节。支持向量机和基于随机的基于森林的分类来识别遵守国家综合癌症网络(NCCN)的遵守治疗指南的临床和非界限预测。我们创建了预测初始治疗意图和治疗改变的模型。我们的结果表明,除了临床因素外,患者被治疗的中心(非临床因素)在遵守NCCN指南方面发挥了重要作用。此外,治疗中心作为决定是否规定adt;然而,它与ADT持续时间无关,并且与治疗改变弱相关。这些中心偏见激发了对NCCN准则依从性和肿瘤学结果的中心特异性障碍细节的进一步调查。此外,我们证明,公开可用的数据集,例如,来自监测,流行病学和最终结果(SEERS),可能无法充分配备,以便在治疗计划上建立这种预测模型。

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