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Improved second harmonic generation and two-photon excitation fluorescence microscopy-based quantitative assessments of liver fibrosis through auto-correction and optimal sampling

机译:通过自动校正和最佳采样改善了基于二次谐波产生和双光子激发荧光显微镜的肝纤维化的定量评估

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Background: Second harmonic generation (SHG)/two-photon excited fluorescence (TPEF) microscopy is commonly used for the quantitative assessment of liver fibrosis; however, the accuracy is susceptible to sampling error and count error due to disturbances induced by some forms of collagen in liver specimens. In this study, we sought to improve the accuracy of quantitative assessments by removing the effects of this disturbing collagen and optimizing the sampling protocol. Methods: Large liver resection samples from 111 patients with chronic hepatitis B were scanned using SHG/TPEF microscopy with multiple adjacent images. During the quantitative assessment, we then removed SHG signals associated with three types of extraneous physiological collagen: large patches of collagen near the boundary of the capsule, collagen around tubular structures, and collagen associated with distorted vessel walls. The optimal sampling protocol was identified by comparing scans from regions of interest of various sizes (3×3 tiles and 5×5 tiles) with full scans of the same tissue. Results: The proposed auto-correction algorithm detected 88 of 97 (90.7%) disturbing collagen on the images from the validation set. Removing these signals of disturbing collagen improved the correlation between Metavir stage and quantification of all 41 proposed collagen features. Through optimal sampling, five scans of 5×5 tiles or ten scans of 3×3 tiles were sufficient to minimize the mean error rate to around 2% of collagen percentage quantification and to achieve similar correlations around 0.27 with Metavir stage as using full tissue scans. Conclusions: Our results demonstrate that the quantitative assessments of liver fibrosis can be greatly enhanced in terms of accuracy and efficiency through optimal sampling and the automated removal of disturbing collagen signals. These types of image processing could be integrated in next-generation SHG/TPEF microscopic systems.
机译:背景:二次谐波产生(SHG)/双光子激发荧光(TPEF)显微镜通常用于肝纤维化的定量评估;然而,由于某些形式的肝脏标本中的某些形式的胶原蛋白诱导,精度易于采样误差和计数错误。在这项研究中,我们试图通过去除这种令人不安的胶原蛋白的影响来提高定量评估的准确性,并优化采样方案。方法:使用具有多个相邻图像的SHG / TPEF显微镜扫描来自111例慢性乙型肝炎患者的大型肝切除样品。在定量评估期间,我们除去与三种类型的外来生理胶原相关的SHG信号:大胶原蛋白附近胶囊边界,管状结构周围的胶原,以及与扭曲的容器壁相关联的胶原。通过将扫描从各种尺寸(3×3瓦片和5×5瓦)的感兴趣区域的扫描与同一组织的全部扫描进行比较来识别最佳采样协议。结果:从验证集中检测到97(90.7%)扰乱胶原蛋白的88个中所提出的自动校正算法。去除扰动胶原的这些信号改善了所有41个提出的胶原特征的Metavir阶段与定量之间的相关性。通过最佳采样,5次扫描的5×5瓦片或3次扫描的扫描足以使平均误差率最小化至约2%的胶原百分比量化,并且在使用完全组织扫描时,达到0.27的相似相关性。 。结论:我们的结果表明,通过最佳采样和扰乱胶原蛋白信号的自动除去,可以在准确性和效率方面大大提高肝纤维化的定量评估。这些类型的图像处理可以集成在下一代SHG / TPEF微观系统中。

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