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Determination of a 17484 bp nucleotide sequence around the 39° region of the Bacillus subtilis chromosome and similarity analysis of the products of putative ORFs

机译:测定枯草芽孢杆菌染色体39°区域的17484bp核苷酸序列及推定ORF产品的相似性分析

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We have determined a 17484 bp nucleotide sequence around the 39° region, located about 480 kb downstream from the zero position of the Bacillus subtilis chromosome physical map. Among the 17 putative ORFs identified, orf1 and orf2 seem to correspond to mtlA and mtlB, encoding mannitol-specific phosphotransferase enzyme II and mannitol-1-phosphate dehydrogenase, respectively. orf4 seems to be another signal peptidase I gene (sipS) of B. subtilis. The putative products of six ORFs were similar to known proteins in data banks, namely a hypothetical 29-7 kDa protein of Escherichia col (Orf7), a lactam utilization protein (Orf8), the urea amidolyase of yeast (Orf12), the IcIR regulatory protein for aceAB of Salmonella typhimurium (Orf13), penicillin-binding protein 2 (Orf16) and aryl-alcohol dehydrogenase (Orf17). The amino acid sequence of Orf3 showed 34% identity with that of LeuC of B. subtilis, though they seem to be functionally different. The remaining seven ORFs did not show similarity to any known proteins.
机译:我们已经确定了39°区域的17484bp核苷酸序列,位于枯草芽孢杆菌染色体物理图的零位置下游约480kb。在鉴定的17个推定ORF中,ORF1和ORF2似乎对应于MTLA和MTLB,分别编码甘露醇特异性磷酸转移酶II和甘露醇-1-磷酸脱氢酶。 ORF4似乎是B.枯草芽孢杆菌的另一个信号肽酶I基因(啜饮)。六个ORF的推定产物与数据库中的已知蛋白质类似,即大肠杆菌(ORF7)的假设29-7 kDa蛋白,内酰胺利用蛋白(ORF8),酵母(ORF12)的尿素酰胺(ORF12),ICIR监管Salmonella Typhimurium(ORF13),青霉素结合蛋白2(ORF16)和芳基 - 醇脱氢酶(ORF17)的蛋白质。 ORF3的氨基酸序列显示出34%的同一性与枯草芽孢杆菌的LEUC的同一性,尽管它们似乎在功能上不同。剩下的七个ORF与任何已知的蛋白质没有显示相似之处。

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