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Insight into the Self-Insertion of a Protein Inside the Boron Nitride Nanotube

机译:洞察氮化硼纳米管内的蛋白质的自插入

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Nanotubes have been considered as promising candidates for protein delivery purposes due to distinct features such as their large enough volume of cavity to encapsulate the protein, providing the sustain and target release. Moreover, possessing the properties of suitable cell viabilities, and biocompatibility on the wide range of cell lines as a result of structural stability, chemical inertness, and noncovalent wrapping ability, boron nitride nanotubes (BNNTs) have caught further attention as protein nanocarriers. However, to assess the encapsulation process of the protein into the BNNT, it is vital to comprehend the protein–BNNT interaction. In the present work, the self-insertion process of the protein SmtA, metallothionein, into the BNNT has been verified by means of the molecular dynamics (MD) simulation under NPT ensemble. It was revealed that the protein was self-inserted into the BNNT through the protein–BNNT van der Waals (vdW) interaction, which descended and reached the average value of ?189.63 kcal·mol~(–1) at 15 ns of the simulation time. The potential mean force (PMF) profile of the encapsulated protein with increasing trend, which was obtained via the pulling process unraveled that the encapsulation of the protein into the BNNT cavity proceeded spontaneously and the self-inserted protein had reasonable stability. Moreover, due to the strong hydrogen interactions between the nitrogen atoms of BNNT and hydrogen atoms of SmtA, there was no evidence of an energy barrier in the vicinity of the BNNT entrance, which resulted in the rapid adsorption of this protein into the BNNT.
机译:纳米管被认为是由于蛋白质传递目的的承诺候选者,这是由于它们的大量足够大量的腔体,以包封蛋白质,提供维持和靶释放。此外,由于结构稳定性,化学惰性和非共价包装能力,具有合适的细胞活性的性质,以及在宽范围的细胞系上的生物相容性,氮化硼纳米管(BNNT)作为蛋白质纳米载体的进一步关注。然而,为了评估蛋白质的包封过程进入BNNT,理解蛋白质BNNT相互作用至关重要。在本作的工作中,通过NPT集合下的分子动力学(MD)模拟已经通过分子动力学(MD)模拟来验证了蛋白质SMTA的自插入过程。揭示蛋白质通过蛋白-BNNT范德华(VDW)相互作用将蛋白质自插入到BNNT中,这降低并达到了15nS的平均值,在仿真的15 ns处达到了189.63kcal·mol〜(-1)的平均值时间。通过拉伸过程获得的包封蛋白的潜在平均力(PMF)谱(PMF)曲线通过拉伸过程而获得,使得蛋白质在BNNT腔中的包封自发地进行,并且自插入蛋白质具有合理的稳定性。此外,由于SMTA的BNNT和氢原子之间的氮原子与SMTA的氢原子之间的强氢相互作用,在BNNT入口附近没有能量屏障,这导致该蛋白质进入BNNT中的快速吸附。

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