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Structural brain imaging in Alzheimer’s disease and mild cognitive impairment: biomarker analysis and shared morphometry database

机译:阿尔茨海默氏病和轻度认知障碍的结构性脑成像:生物标志物分析和共享形态测量数据库

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摘要

Magnetic resonance (MR) imaging is a powerful technique for non-invasive in-vivo imaging of the human brain. We employed a recently validated method for robust cross-sectional and longitudinal segmentation of MR brain images from the Alzheimer’s Disease Neuroimaging Initiative (ADNI) cohort. Specifically, we segmented 5074 MR brain images into 138 anatomical regions and extracted time-point specific structural volumes and volume change during follow-up intervals of 12 or 24 months. We assessed the extracted biomarkers by determining their power to predict diagnostic classification and by comparing atrophy rates to published meta-studies. The approach enables comprehensive analysis of structural changes within the whole brain. The discriminative power of individual biomarkers (volumes/atrophy rates) is on par with results published by other groups. We publish all quality-checked brain masks, structural segmentations, and extracted biomarkers along with this article. We further share the methodology for brain extraction (pincram) and segmentation (MALPEM, MALPEM4D) as open source projects with the community. The identified biomarkers hold great potential for deeper analysis, and the validated methodology can readily be applied to other imaging cohorts.
机译:磁共振(MR)成像是用于人脑非侵入性体内成像的强大技术。我们采用了最近经过验证的方法来对来自阿尔茨海默氏病神经影像计划(ADNI)队列的MR脑图像进行有效的横截面和纵向分割。具体来说,我们将5074 MR脑图像分割为138个解剖区域,并提取了12或24个月的随访时间点的特定结构体积和体积变化。我们通过确定提取的生物标志物预测诊断分类的能力以及将萎缩率与已发表的荟萃研究进行比较来评估提取的生物标志物。该方法可以对整个大脑内部的结构变化进行全面分析。单个生物标志物的判别力(量/萎缩率)与其他组的结果相当。我们将与本文一起发布所有经过质量检查的脑罩,结构分割和提取的生物标记。我们还与社区共享了作为开源项目的大脑提取(匹克仑)和分割(MALPEM,MALPEM4D)的方法。鉴定出的生物标记物具有进行更深层分析的巨大潜力,并且经过验证的方法可以很容易地应用于其他成像人群。

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