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TgaA, a VirB1-Like Component Belonging to a Putative Type IV Secretion System of Bifidobacterium bifidum MIMBb75

机译:TgaA,属于双歧双歧杆菌MIMBb75的IV型分泌系统的VirB1样成分

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Bifidobacterium bifidum MIMBb75 is a human intestinal isolate demonstrated to be interactive with the host and efficacious as a probiotic. However, the molecular biology of this microorganism is yet largely unknown. For this reason, we undertook whole-genome sequencing of B. bifidum MIMBb75 to identify potential genetic factors that would explain the metabolic and probiotic attributes of this bacterium. Comparative genomic analysis revealed a 45-kb chromosomal region that comprises 19 putative genes coding for a potential type IV secretion system (T4SS). Thus, we undertook the initial characterization of this genetic region by studying the putative virB1-like gene, named tgaA. Gene tgaA encodes a peptidoglycan lytic enzyme containing two active domains: lytic murein transglycosylase (LT, cd00254.3) and cysteine- and histidine-dependent amidohydrolase/peptidase (CHAP, pfam05257.4). By means of several in vitro assays, we experimentally confirmed that protein TgaA, consistent with its computationally assigned role, has peptidoglycan lytic activity, which is principally associated to the LT domain. Furthermore, immunofluorescence and immunogold labeling showed that the protein TgaA is abundantly expressed on the cell surface of B. bifidum MIMBb75. According to the literature, the T4SSs, which have not been characterized before in bifidobacteria, can have important implications for bacterial cell-to-cell communication as well as cross talk with host cells, justifying the interest for further studies aimed at the investigation of this genetic region.
机译:双歧双歧杆菌MIMBb75是一种人类肠道分离株,被证明与宿主相互作用并且作为益生菌有效。然而,该微生物的分子生物学仍是未知的。因此,我们对双歧双歧杆菌MIMBb75进行了全基因组测序,以鉴定可解释该细菌的代谢和益生菌特性的潜在遗传因素。比较基因组分析揭示了一个45kb的染色体区域,其中包含19个可能的IV型分泌系统(T4SS)编码基因。因此,我们通过研究推定的virB1样基因tgaA对该基因区域进行了初步表征。基因tgaA编码一种肽聚糖分解酶,该酶含有两个活性域:分解性Murein转糖基化酶(LT,cd00254.3)和半胱氨酸和组氨酸依赖性酰胺水解酶/肽酶(CHAP,pfam05257.4)。通过几种体外试验,我们通过实验证实了蛋白TgaA,与其在计算上所赋予的作用一致,具有肽聚糖溶解活性,该活性主要与LT结构域相关。此外,免疫荧光和免疫金标记显示蛋白TgaA在双歧双歧杆菌MIMBb75的细胞表面上大量表达。根据文献,T4SSs在双歧杆菌中没有被鉴定过,可能对细菌细胞间的交流以及与宿主细胞的串扰具有重要的意义,这证明了有兴趣进一步研究该细菌遗传区域。

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