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首页> 外文期刊>Bulletin of the Korean Chemical Society >Refined Alkali Metal Ion Parameters for the OPC Water Model
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Refined Alkali Metal Ion Parameters for the OPC Water Model

机译:OPC水模型的精制碱金属离子参数

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摘要

Using all‐atom molecular dynamics simulations with Joung–Cheatham ion parameters and the OPC water model, the osmotic pressure values of monovalent alkali metal chloride solutions (KCl and NaCl) were calculated and compared to experimental values. The simulated osmotic pressure data were overestimated at high concentrations. To close the gap between simulation and experiment, we attempted to modify the Lennard–Jones interaction parameters of the cation–water oxygen pairs explicitly using the unequal Lorentz–Berthelot combination rule, such that experimental osmotic pressure values for a range of concentrations were well reproduced. These novel ion parameters could be potentially beneficial to simulation studies of G‐quadruplex DNA molecules, where ions play a key role in their folding process.
机译:使用具有Joung-Cheatham离子参数和OPC水模型的全原子分子动力学模拟,计算了一价碱金属氯化物溶液(KCl和NaCl)的渗透压值,并将其与实验值进行比较。在高浓度下,模拟渗透压数据被高估了。为了缩小模拟与实验之间的差距,我们尝试使用不相等的Lorentz-Berthelot组合规则显式修改阳离子-水氧对的Lennard-Jones相互作用参数,从而可以很好地再现一系列浓度的实验渗透压值。这些新颖的离子参数可能对G-四链体DNA分子的模拟研究具有潜在的益处,其中离子在其折叠过程中起着关键作用。

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