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首页> 外文期刊>BMC Genomics >Differential gene expression in liver and small intestine from lactating rats compared to age-matched virgin controls detects increased mRNA of cholesterol biosynthetic genes
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Differential gene expression in liver and small intestine from lactating rats compared to age-matched virgin controls detects increased mRNA of cholesterol biosynthetic genes

机译:与年龄相匹配的原始对照相比,泌乳大鼠肝脏和小肠中的差异基因表达检测到胆固醇生物合成基因的mRNA增加

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Background Lactation increases energy demands four- to five-fold, leading to a two- to three-fold increase in food consumption, requiring a proportional adjustment in the ability of the lactating dam to absorb nutrients and to synthesize critical biomolecules, such as cholesterol, to meet the dietary needs of both the offspring and the dam. The size and hydrophobicity of the bile acid pool increases during lactation, implying an increased absorption and disposition of lipids, sterols, nutrients, and xenobiotics. In order to investigate changes at the transcriptomics level, we utilized an exon array and calculated expression levels to investigate changes in gene expression in the liver, duodenum, jejunum, and ileum of lactating dams when compared against age-matched virgin controls. Results A two-way mixed models ANOVA was applied to detect differentially expressed genes. Significance calls were defined as a p Cyp7a1, which catalyzes the rate limiting step in the bile acid biosynthetic pathway, was also significantly increased in liver. In addition, decreased levels of mRNA associated with T-cell signaling were found in the jejunum and ileum. Several members of the Solute Carrier (SLC) and Adenosine Triphosphate Binding Cassette (ABC) superfamilies of membrane transporters were found to be differentially expressed; these genes may play a role in differences in nutrient and xenobiotic absorption and disposition. mRNA expression of SLC39a4_predicted, a zinc transporter, was increased in all tissues, suggesting that it is involved in increased zinc uptake during lactation. Microarray data are available through GEO under GSE19175. Conclusions We detected differential expression of mRNA from several pathways in lactating dams, including upregulation of the cholesterol biosynthetic pathway in liver and intestine, consistent with Srebp activation. Differential T-Cell signaling in the two most distal regions of the small intestine (ileum and jejunum) was also noted, as well as differential expression of transporters that likely play a key role in nutrient uptake.
机译:背景泌乳使能量需求增加了四到五倍,导致食物消耗增加了两到三倍,需要按比例调整泌乳坝吸收营养物质和合成关键生物分子(例如胆固醇)的能力,以满足后代和大坝的饮食需求。泌乳期胆汁酸池的大小和疏水性增加,这意味着脂质,固醇,营养素和异种生物的吸收和分布增加。为了研究转录组学水平的变化,我们使用了一个外显子阵列并计算了表达水平,以研究与年龄相匹配的原始对照相比,泌乳大坝的肝脏,十二指肠,空肠和回肠中基因表达的变化。结果采用双向混合模型ANOVA检测差异表达基因。显着性定义为p Cyp7a1,其催化胆汁酸生物合成途径中的限速步骤,在肝脏中也显着增加。另外,在空肠和回肠中发现与T细胞信号转导相关的mRNA水平降低。膜转运蛋白的溶质载体(SLC)和三磷酸腺苷结合盒(ABC)超家族的几个成员被发现是差异表达的。这些基因可能在营养和异种生物吸收和处置的差异中起作用。 SLC39a4_predicted(一种锌转运蛋白)的mRNA表达在所有组织中均增加,表明其与哺乳期间锌吸收的增加有关。可通过GSE19175下的GEO获得微阵列数据。结论我们在泌乳大坝中检测到了多种途径中mRNA的差异表达,包括肝脏和肠道中胆固醇生物合成途径的上调,这与Srebp激活相一致。还注意到在小肠的两个最远端区域(回肠和空肠)中的T细胞信号差异,以及转运蛋白的差异表达可能在养分吸收中起关键作用。

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