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Genetics of ulcerative colitis: putting into perspective the incremental gains from Indian studies

机译:溃疡性结肠炎的遗传学:从印度的研究中获得增量收益

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Ulcerative colitis (UC), one of the two clinical subtypes of inflammatory bowel disease is perceived as a potential 'sleeping giant' in the Indian subcontinent. Clinical manifestation is overall believed to be the same across ethnic groups but overwhelming genetics from large European and fewer non-European studies have revealed shared as well as unique disease susceptibly signaturesbetween them, pointing to population specific differences at genomic and environmental levels. A systematic recount of the four major eras in UC genetics spanning earliest linkage analysis, cherry picked candidate gene association studies, unbiased genomewide association studies, their logical extension in trans-ethnic setting (Immunochip study), lastly whole exome sequencing efforts forrare variant burden; and lessons learnt thereof in context of genetically distinct Indian population was attempted in this review. Genetic heterogeneity manifesting at allelic/locus level across these approaches has been the consistent finding through the range of pan India studies. On the other hand, these salient findings also highlight the limitations of even the best of these genetic leadsfor prognostic/clinical application. The imminent need, therefore, for the UC research community to adopt newer approaches/tools with improved study design to (i) gain better insight into genetic/mechanistic basis of disease; (ii) identify biomarkers of immediate translational value; and (iii) develop new/alternate therapeutic options is emphasized at the end.
机译:溃疡性结肠炎(UC)是炎症性肠病的两种临床亚型之一,被认为是印度次大陆的潜在“沉睡巨人”。人们普遍认为,各族裔之间的临床表现是相同的,但来自大型欧洲的压倒性遗传学和较少的非欧洲研究表明,它们之间具有共同的以及独特的疾病易感性特征,指出了在基因组和环境水平上特定人群的差异。系统地回顾了UC遗传学的四个主要时代,涵盖了最早的连锁分析,樱桃选择的候选基因关联研究,无偏见的全基因组关联研究,它们在跨种族环境中的逻辑延伸(Immunochip研究),最后的整个外显子测序工作可大大减轻变异负担;本文试图从遗传上不同的印度人口中吸取教训。在整个印度研究中,通过这些方法在等位基因/基因座水平上表现出的遗传异质性一直是一致的发现。另一方面,这些突出的发现也凸显了即使是最好的遗传线索在预后/临床应用中的局限性。因此,UC研究界迫切需要采用具有改进的研究设计的更新的方法/工具,以:(i)对疾病的遗传/机理基础有更深入的了解; (ii)确定具有即时翻译价值的生物标记; (iii)最后强调开发新的/替代的治疗选择。

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