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Corynebacterium pseudotuberculosis RNA-seq data from abiotic stresses

机译:来自非生物胁迫的假结核杆菌 RNA-seq数据

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Corynebacterium pseudotuberculosis causes significant loss to goat and sheep farmers because it is the causal agent of the infectious disease caseous lymphadenitis, which may lead to outcomes ranging from skin injury to animal death (Ruiz et al., 2011) . This bacterium was grown under osmotic (2M), acid (pH) and heat (50°C) stress and under control (Normal-BHI brain heart infusion) conditions, which simulate the conditions faced by the bacteria during the infectious process. Subsequently, cDNA of each condition was sequenced by the SOLiD3 Plus platform using the RNA-Seq technique . The data produced was processed to evaluate the differential gene expression, which is helpful to understand the adaptation mechanisms during the infection in the host. The sequencing data of all conditions are available in the European Bioinformatics Institute (EBI) repository under accession number E-MTAB-2017.
机译:假结核棒杆菌对山羊和绵羊农民造成重大损失,因为它是干酪样淋巴结炎传染病的病原体,可能导致从皮肤损伤到动物死亡的各种后果(Ruiz等,2011)。该细菌在渗透压(2M),酸(pH)和热(50°C)压力下以及在受控(正常BHI脑心浸液)条件下生长,该条件模拟细菌在感染过程中面临的条件。随后,使用RNA-Seq技术通过SOLiD3 Plus平台对每种条件的cDNA进行测序。处理产生的数据以评估差异基因表达,这有助于了解宿主感染期间的适应机制。所有条件的测序数据均可在欧洲生物信息学研究所(EBI)信息库中获得,登录号为E-MTAB-2017。

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