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首页> 外文期刊>The Journal of Veterinary Medical Science >Evaluation of loop-mediated isothermal amplification method (LAMP) for pathogenic Leptospira spp. detection with leptospires isolation and real-time PCR
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Evaluation of loop-mediated isothermal amplification method (LAMP) for pathogenic Leptospira spp. detection with leptospires isolation and real-time PCR

机译:评价致病性钩端螺旋体的环介导的等温扩增方法(LAMP)。钩端螺旋体分离和实时PCR检测

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References(27) Cited-By(2) Leptospirosis has been one of the worldwide zoonotic diseases caused by pathogenic Leptospira spp. Many molecular techniques have consecutively been developed to detect such pathogen including loop–mediated isothermal amplification method (LAMP). The objectives of this study were to evaluate the diagnostic accuracy of LAMP assay and real-time PCR using bacterial culture as the gold standard and to assess the agreement among these three tests using Cohen’s kappa statistics. In total, 533 urine samples were collected from 266 beef and 267 dairy cattle reared in central region of Thailand. Sensitivity and specificity of LAMP were 96.8% (95% CI 81.5–99.8) and 97.0% (95% CI 94.9–98.2), respectively. The accuracy of LAMP (97.0%) was significantly higher than that of real-time PCR (91.9%) at 95% CI. With Cohen’s kappa statistics, culture method and LAMP were substantially agreed with each other (77.4%), whereas real-time PCR only moderately agreed with culture (47.7%) and LAMP (45.3%), respectively. Consequently, LAMP was more effective than real-time PCR in detecting Leptospira spp. in the urine of cattle. Besides, LAMP had less cost and was simpler than real-time PCR. Thus, LAMP was an excellent alternative for routine surveillance of leptospirosis in cattle.
机译:参考文献(27)被引用的By(2)钩端螺旋体病已成为由致病性钩端螺旋体引起的全球人畜共患病之一。相继开发了许多分子技术来检测此类病原体,包括环介导的等温扩增法(LAMP)。这项研究的目的是评估以细菌培养为金标准的LAMP分析和实时PCR的诊断准确性,并使用Cohen的kappa统计量评估这三项测试之间的一致性。总共从泰国中部地区饲养的266头牛和267头奶牛中收集了533个尿液样本。 LAMP的敏感性和特异性分别为96.8%(95%CI 81.5-99.8)和97.0%(95%CI 94.9-98.2)。在95%CI时,LAMP的准确性(97.0%)显着高于实时PCR的准确性(91.9%)。根据科恩(Cohen)的kappa统计资料,培养方法和LAMP基本一致(77.4%),而实时荧光定量PCR仅中等程度地同意培养(47.7%)和LAMP(45.3%)。因此,在检测钩端螺旋体时,LAMP比实时PCR更有效。在牛的尿液中。此外,与实时PCR相比,LAMP的成本更低且更简单。因此,LAMP是常规监测牛钩端螺旋体病的极佳选择。

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