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首页> 外文期刊>PLoS Computational Biology >Integrating Extrinsic and Intrinsic Cues into a Minimal Model of Lineage Commitment for Hematopoietic Progenitors
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Integrating Extrinsic and Intrinsic Cues into a Minimal Model of Lineage Commitment for Hematopoietic Progenitors

机译:将内在和内在线索整合到造血祖细胞谱系承诺的最小模型中

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摘要

Autoregulation of transcription factors and cross-antagonism between lineage-specific transcription factors are a recurrent theme in cell differentiation. An equally prevalent event that is frequently overlooked in lineage commitment models is the upregulation of lineage-specific receptors, often through lineage-specific transcription factors. Here, we use a minimal model that combines cell-extrinsic and cell-intrinsic elements of regulation in order to understand how both instructive and stochastic events can inform cell commitment decisions in hematopoiesis. Our results suggest that cytokine-mediated positive receptor feedback can induce a “switch-like” response to external stimuli during multilineage differentiation by providing robustness to both bipotent and committed states while protecting progenitors from noise-induced differentiation or decommitment. Our model provides support to both the instructive and stochastic theories of commitment: cell fates are ultimately driven by lineage-specific transcription factors, but cytokine signaling can strongly bias lineage commitment by regulating these inherently noisy cell-fate decisions with complex, pertinent behaviors such as ligand-mediated ultrasensitivity and robust multistability. The simulations further suggest that the kinetics of differentiation to a mature cell state can depend on the starting progenitor state as well as on the route of commitment that is chosen. Lastly, our model shows good agreement with lineage-specific receptor expression kinetics from microarray experiments and provides a computational framework that can integrate both classical and alternative commitment paths in hematopoiesis that have been observed experimentally.
机译:转录因子的自动调节和谱系特异性转录因子之间的交叉拮抗作用是细胞分化的一个经常性主题。在谱系承诺模型中经常被忽视的一个同样普遍的事件是谱系特异性受体的上调,通常是通过谱系特异性转录因子引起的。在这里,我们使用一个最小的模型,将细胞外和细胞内在的调节相结合,以了解指导性事件和随机性事件如何在造血过程中指导细胞定型决策。我们的研究结果表明,细胞因子介导的阳性受体反馈可以通过提供双能状态和定型状态的鲁棒性,同时保护祖细胞免受噪声诱导的分化或失配,从而在多谱系分化过程中诱导对外部刺激的“开关样”反应。我们的模型为指导性和随机性承诺理论提供了支持:细胞命运最终是由谱系特异性转录因子驱动的,但是细胞因子信号传导可以通过调节这些固有的嘈杂的细胞命运决定,并通过复杂,相关的行为(例如,配体介导的超敏性和强大的多重稳定性。模拟进一步表明,分化为成熟细胞状态的动力学可以取决于起始祖细胞状态以及所选择的承诺途径。最后,我们的模型与微阵列实验的谱系特异性受体表达动力学表现出良好的一致性,并提供了一个计算框架,该框架可以将经典的和替代的承诺途径整合到已经通过实验观察到的造血过程中。

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