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Molecular Detection and Characterization of Mycoplasma pneumoniae Among Patients Hospitalized With Community-Acquired Pneumonia in the United States

机译:在美国住院的社区获得性肺炎患者中肺炎支原体的分子检测和表征

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Background. ? Mycoplasma pneumoniae is a common cause of community-acquired pneumonia (CAP). The molecular characteristics of M pneumoniae detected in patients hospitalized with CAP in the United States are poorly described. Methods. ?We performed molecular characterization of M pneumoniae in nasopharyngeal/oropharyngeal swabs from children and adults hospitalized with CAP in the Centers for Disease Control and Prevention Etiology of Pneumonia in the Community (EPIC) study, including P1 typing, multilocus variable-number tandem-repeat analysis (MLVA), and macrolide susceptibility genotyping. Results. ?Of 216 M pneumoniae polymerase chain reaction-positive specimens, 40 (18.5%) were obtained from adults and 176 (81.5%) from children. P1 type distribution differed between adults (64% type 1 and 36% type 2) and children (84% type 1, 13% type 2, and 3% variant) (P .05) and among sites (P .01). Significant differences in the proportions of MLVA types 4/5/7/2 and 3/5/6/2 were also observed by age group (P .01) and site (P .01). A macrolide-resistant genotype was identified in 7 (3.5%) specimens, 5 of which were from patients who had recently received macrolide therapy. No significant differences in clinical characteristics were identified among patients with various strain types or between macrolide-resistant and -sensitive M pneumoniae infections. Conclusions. ?The P1 type 1 genotype and MLVA type 4/5/7/2 predominated, but there were differences between children and adults and among sites. Macrolide resistance was rare. Differences in strain types did not appear to be associated with differences in clinical outcomes. Whole genome sequencing of M pneumoniae may help identify better ways to characterize strains.
机译:背景。 ?肺炎支原体是社区获得性肺炎(CAP)的常见原因。在美国,CAP住院患者中检测到的肺炎支原体的分子特征描述得很少。方法。在社区疾病预防和肺炎病因学中心(EPIC)研究中,我们对接受CAP住院治疗的儿童和成人的鼻咽/口咽拭子中的肺炎支原体进行了分子鉴定,包括P1型分型,多位点可变数目的串联重复分析(MLVA)和大环内酯类药物敏感性基因分型。结果。 ②在216 M肺炎聚合酶链反应阳性标本中,成年人获得40份(18.5%),儿童获得176份(81.5%)。成人(64%的1型和36%的2型)和儿童(84%的1型,13%的2型和3%的变体)之间的P1型分布不同(P <.05)和地点之间(P <.01) 。年龄组(P <.01)和部位(P <.01)也观察到4/5/7/2和3/5/6/2型MLVA比例的显着差异。在7个(3.5%)标本中鉴定出大环内酯耐药基因型,其中5个来自最近接受大环内酯治疗的患者。在具有不同菌株类型的患者之间或在对大环内酯类耐药和敏感的肺炎支原体感染之间,没有发现临床特征的显着差异。结论。 P1 1型基因型和MLVA 4/5/7/2型占主导地位,但儿童与成人之间以及站点之间存在差异。大环内酯类药物的耐药性罕见。菌株类型的差异似乎与临床结果的差异无关。肺炎支原体的全基因组测序可能有助于确定表征菌株的更好方法。

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