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首页> 外文期刊>Romanian Journal of Biophysics >ANALYSIS OF PARITY RATIO OF PROTEIN SEQUENCES: A NEW APPROACH BASED ON CHARGAFF’S RULE
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ANALYSIS OF PARITY RATIO OF PROTEIN SEQUENCES: A NEW APPROACH BASED ON CHARGAFF’S RULE

机译:蛋白质序列的奇偶校验比分析:一种基于查格夫规则的新方法

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Amino acid residues are classified in many groups such as hydrophobic, polar, charged, etc. Nevertheless, these groups are not saying any uniqueness under statistical results. Different classifications have different statistical results. Many of the groupings of amino acid residues analyses are not related to Chargaff’s rule. But the nucleotide favorable amino acid grouping is unique under statistical calculation. It is also related to the Chargaff’s rule of protein nucleotide content. The basis of present explanations of the manner in which the amino acids are activated before being assembled to make a protein; they are being invoked incessantly in attempts to unravel the nucleotide code which is thought to be responsible for specifying the amino acid sequence of proteins. Finally, we observed that the parity ratio of protein sequences ranges between 0.96% and 1.04% for most of the protein families. The +0.04% variation may be rectified from the alignment of the sequencing. The difference between the parity ratio of these families of protein sequences and the unity of Chargaff rule range from –0.3 to +0.3. We propose that the protein parity ratio for nucleotide favorable amino acid grouping has similar statistical calculation in all protein sequences. This statistical calculation is similar to Chargaff’s rule. The approach proposed in the present paper may be further pursued to show how different classifications of amino acids can complement each other to yield the properties of extant protein sequences.
机译:氨基酸残基分为许多组,例如疏水性,极性,带电荷等。然而,在统计结果下,这些组并没有说出任何唯一性。不同的分类具有不同的统计结果。氨基酸残基分析的许多分组与查格夫定律无关。但是根据统计计算,核苷酸有利的氨基酸分组是独特的。这也与查格夫的蛋白质核苷酸含量规则有关。本解释说明氨基酸在组装成蛋白质之前被活化的方式的基础;为了试图弄清核苷酸代码,人们不停地调用它们,认为核苷酸代码负责指定蛋白质的氨基酸序列。最后,我们观察到大多数蛋白质家族的蛋白质序列奇偶校验率在0.96%和1.04%之间。 + 0.04%的变异可从测序的比对中纠正。这些蛋白质序列家族的奇偶校验比与Chargaff规则的统一性之间的差异在–0.3至+0.3之间。我们建议对核苷酸有利的氨基酸分组的蛋白质奇偶比在所有蛋白质序列中具有相似的统计计算。此统计计算类似于Chargaff的规则。可以继续采用本文提出的方法,以显示不同的氨基酸分类如何相互补充以产生现存蛋白质序列的特性。

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