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A protein and mRNA expression-based classification of gastric cancer

机译:基于蛋白质和mRNA表达的胃癌分类

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The overall survival of gastric carcinoma patients remains poor despite improved control over known risk factors and surveillance. This highlights the need for new classifications, driven towards identification of potential therapeutic targets. Using sophisticated molecular technologies and analysis, three groups recently provided genetic and epigenetic molecular classifications of gastric cancer (The Cancer Genome Atlas, 鈥楽ingapore-Duke鈥?study, and Asian Cancer Research Group). Suggested by these classifications, here, we examined the expression of 14 biomarkers in a cohort of 146 gastric adenocarcinomas and performed unsupervised hierarchical clustering analysis using less expensive and widely available immunohistochemistry and in situ hybridization. Ultimately, we identified five groups of gastric cancers based on Epstein鈥揃arr virus (EBV) positivity, microsatellite instability, aberrant E-cadherin, and p53 expression; the remaining cases constituted a group characterized by normal p53 expression. In addition, the five categories correspond to the reported molecular subgroups by virtue of clinicopathologic features. Furthermore, evaluation between these clusters and survival using the Cox proportional hazards model showed a trend for superior survival in the EBV and microsatellite-instable related adenocarcinomas. In conclusion, we offer as a proposal a simplified algorithm that is able to reproduce the recently proposed molecular subgroups of gastric adenocarcinoma, using immunohistochemical and in situ hybridization techniques.
机译:尽管对已知危险因素和监测的控制得到了改善,但胃癌患者的总体生存仍然很差。这突出显示了对新分类的需求,以识别潜在的治疗目标。使用先进的分子技术和分析,最近三个小组提供了胃癌的遗传和表观遗传分子分类(癌症基因组图集,“新加坡-杜克大学”研究和亚洲癌症研究小组)。由这些分类所建议,在这里,我们检查了一组146例胃腺癌中14种生物标记的表达,并使用较便宜且可广泛使用的免疫组化和原位杂交技术进行了无监督的分级聚类分析。最终,我们根据爱泼斯坦揃病毒(EBV)阳性,微卫星不稳定性,E-钙黏着蛋白异常和p53表达确定了五组胃癌。其余病例组成以p53正常表达为特征的组。另外,由于临床病理特征,这五个类别对应于所报道的分子亚组。此外,使用Cox比例风险模型对这些簇与生存之间的评估表明,在EBV和微卫星不稳定相关腺癌中有更高生存率的趋势。总之,我们提出了一种简化的算法,该算法能够使用免疫组织化学和原位杂交技术重现最近提出的胃腺癌分子亚组。

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