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Sugar dynamics in large particles during in vitro incubation experiments

机译:体外孵育实验中大颗粒中的糖动力学

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ABSTRACT: Large particles (60 µm) were collected using in situ pumps deployed at 30 and 200 m depth at 2 typical stations in the southern Indian Ocean (Polar Front Zone [PFZ] and Sub-Antarctic Area [SAr]). The samples were incubated in vitro with their own bacterial assemblages for 7 to 17 days in batches under oxic conditions in the dark. Particulate organic carbon (POC) and sugars were monitored over time. Particulate sugars (PCHO-C) accounted for 5 to 20% of POC in the SAr, while they represented 5 to 8% of POC in the PFZ station at the beginning of the experiments. Molecular level analysis indicated that at the time of collection, ribose was among the most abundant sugars (18 to 30 wt% of PCHO-C) at the PFZ station and was rapidly degraded (k = 0.051 to 0.058 d–1) over the course of the experiment, while this sugar was below detection limits in the SAr. Our results also showed an increase in the relative abundance of deoxysugars (fucose and rhamnose), suggesting that these sugars have the potential to be used as indicators of the bacterial activity and evaluate the degradation status of POM in both areas. The kinetic study indicated that pentoses were degraded faster than hexoses, while deoxysugars exhibited the lowest degradation rates. This study demonstrated that total sugar degradation rates do not reflect the rates of all individual components, but rather a disparate collection of rates among sugars classes and individual sugars, which very likely can vary significantly in relation to the origin of particles.
机译:摘要:使用部署在印度洋南部(极地锋区[PFZ]和南极地区)的两个典型站点的深度分别为30和200 m的原位泵收集大颗粒(> 60 µm) [SAr])。将样品与它们自己的细菌组合在黑暗中于有氧条件下分批孵育7至17天。随时间监测颗粒有机碳(POC)和糖。实验开始时,颗粒糖(PCHO-C)占SAr中POC的5%至20%,而它们占PFZ站中POC的5%至8%。分子水平分析表明,在收集时,核糖是PFZ站中最丰富的糖(占PCHO-C的18至30 wt%)之一,并迅速降解( k = 0.051至0.058)在实验过程中d –1 ),而该糖低于SAr中的检测极限。我们的结果还表明,脱氧糖(岩藻糖和鼠李糖)的相对丰度增加,表明这些糖有潜力用作细菌活性的指标,并评估这两个区域中POM的降解状态。动力学研究表明戊糖的降解速度快于己糖,而脱氧糖的降解率最低。这项研究表明,总糖的降解速率并不反映所有单个成分的速率,而是糖类和单个糖之间速率的不同集合,这很可能与颗粒的来源有关。

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