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Sequence variation in ROP8 gene among Toxoplasma gondii isolates from different hosts and geographical localities

机译:弓形虫来自不同宿主和地理位置的分离株ROP8基因的序列变异

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摘要

The protozoan parasite Toxoplasma gondii has a worldwide distribution; it can cause serious diseases in humans and almost all other warm-blooded animals. Different genotypes of T. gondii result in different lesions in the same host. T. gondii rhoptry protein 8 (TgROP8) is a major factor of T. gondii acute virulence. We examined sequence variation in the TgROP8 gene among T. gondii isolates from different hosts and geographical localities. The TgROP8 gene was amplified from individual isolates and sequenced. A phylogenetic tree was constructed using Bayesian inference, maximum parsimony, and maximum likelihood based on the sequences obtained plus TgME49 from the ToxoDB database. The TgROP8 gene was 1728 bp in length for all the examined T. gondii strains, and their A+T contents were 45.37-45.95%. Sequence analysis detected 140 (0.06-5.56%) variable nucleotide positions resulting in 96 (0-10.78%) amino acid substitutions. Sequence variations in the TgROP8 gene resulted in polymorphic restriction sites for endonucleases BstBI, BsaI, and XhoI, which allowed the differentiation of the three classical genotype strains (types I, II, and III) by polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP). However, phylogenetic analyses indicated that the TgROP8 gene is not a suitable genetic marker for population studies of T. gondii.
机译:原生动物的寄生虫弓形虫在世界范围内分布。它可以对人类和几乎所有其他温血动物造成严重疾病。弓形虫的不同基因型在同一宿主中导致不同的病变。弓形虫Rhoptry蛋白8(TgROP8)是弓形虫急性毒力的主要因素。我们检查了来自不同宿主和地理位置的弓形虫分离株中TgROP8基因的序列变异。从单个分离物中扩增出TgROP8基因并进行测序。根据从ToxoDB数据库获得的序列和TgME49,使用贝叶斯推断,最大简约度和最大似然性构建系统发育树。对于所有检查的弓形虫菌株,TgROP8基因的长度为1728 bp,其A + T含量为45.37-45.95%。序列分析检测到140(0.06-5.56%)个可变核苷酸位置,导致96(0-10.78%)个氨基酸取代。 TgROP8基因的序列变异导致核酸内切酶BstBI,BsaI和XhoI的多态性限制性酶切位点,从而允许通过聚合酶链反应-限制性片段长度多态性(PCR)区分三种经典基因型菌株(I,II和III型)。 -RFLP)。但是,系统发育分析表明,TgROP8基因不是适合弓形虫种群研究的遗传标记。

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