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Differentiating heart failure phenotypes using sex-specific transcriptomic and proteomic biomarker panels

机译:使用性别特异性转录组学和蛋白质组学生物标志物区分心力衰竭表型

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Abstract Aims Heart failure with preserved ejection fraction (HFpEF) accounts for 30?¢????50% of patients with heart failure (HF). A major obstacle in HF management is the difficulty in differentiating between HFpEF and heart failure with reduced ejection fraction (HFrEF) using conventional clinical and laboratory investigations. The aim of this study is to develop robust transcriptomic and proteomic biomarker signatures that can differentiate HFpEF from HFrEF. Methods and results A total of 210 HF patients were recruited in participating institutions from the Alberta HEART study. An expert clinical adjudicating panel differentiated between patients with HFpEF and HFrEF. The discovery cohort consisted of 61 patients, and the replication cohort consisted of 70 patients. Transcriptomic and proteomic data were analysed to find panels of differentiating HFpEF from HFrEF. In the discovery cohort, a 22-transcript panel was found to differentiate HFpEF from HFrEF in male patients with a cross-validation AUC of 0.74, as compared with 0.70 for N-terminal pro-B-type natriuretic peptide (NT-proBNP) in those same patients. An ensemble of the transcript panel and NT-pro-BNP yielded a cross-validation AUC of 0.80. This performance improvement was also observed in the replication cohort. An ensemble of the transcriptomic panel with NT-proBNP produced a replication AUC of 0.90, as compared with 0.74 for NT-proBNP alone and 0.73 for the transcriptomic panel. Conclusions We have identified a male-specific transcriptomic biomarker panel that can differentiate between HFpEF and HFrEF. These biosignatures could be further replicated on other patients and potentially be developed into a blood test for better management of HF patients.
机译:摘要目的保留射血分数(HFpEF)的心力衰竭占心力衰竭(HF)患者的30%〜50%。 HF管理的主要障碍是难以通过常规的临床和实验室研究来区分HFpEF和心力衰竭,并伴有射血分数降低(HFrEF)。这项研究的目的是开发可以区分HFpEF和HFrEF的强大的转录组学和蛋白质组学生物标志物特征。方法和结果在艾伯塔省HEART研究的参与机构中共招募了210名HF患者。专家临床裁决小组对HFpEF和HFrEF患者进行了区分。发现队列由61位患者组成,复制队列由70位患者组成。分析了转录组学和蛋白质组学数据,以发现区分HFpEF和HFrEF的面板。在该发现队列中,发现22个转录物组可将男性患者的交叉验证AUC为0.74的HFrEF与HFrEF区别开来,而N端pro-B型利钠肽(NT-proBNP)的交叉验证为0.70那些病人转录组和NT-pro-BNP的集合产生的交叉验证AUC为0.80。在复制队列中也观察到了这种性能改进。与NT-proBNP相比,转录组的整体产生的复制AUC为0.90,而单独的NT-proBNP为0.74,转录组为0.73。结论我们已经鉴定出可以区分HFpEF和HFrEF的男性特异性转录组生物标志物组。这些生物特征可以在其他患者上进一步复制,并有可能发展成为血液检查以更好地管理HF患者。

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