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Specific plasmid patterns and high rates of bacterial co‐occurrence within the coral holobiont

机译:特定的质粒模式和高发共生细菌

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Despite the importance of coral microbiomes for holobiont persistence, the interactions among these are?not well understood. In particular, knowledge of the co‐occurrence and taxonomic importance of specific members of the microbial core, as well as patterns of specific mobile genetic elements (MGEs), is lacking. We used seawater and mucus samples collected from Mussismilia hispida colonies on two reefs located in Bahia, Brazil, to disentangle their associated bacterial communities, intertaxa correlations, and plasmid patterns. Proxies for two broad‐host‐range (BHR) plasmid groups, IncP‐1β and PromA, were screened. Both groups were significantly (up to 252 and 100%, respectively) more abundant in coral mucus than in seawater. Notably, the PromA plasmid group was detected only in coral mucus samples. The core bacteriome of M.?hispida ?mucus was composed primarily of members of the Proteobacteria, followed by those of Firmicutes. Significant host specificity and co‐occurrences among different groups of the dominant phyla (e.g., Bacillaceae and Pseudoalteromonadaceae and the genera Pseudomonas , Bacillus, and Vibrio ) were detected. These relationships were observed for both the most abundant phyla and the bacteriome core, in which most of the operational taxonomic units showed intertaxa correlations. The observed evidence of host‐specific bacteriome and co‐occurrence (and potential symbioses or niche space co‐dominance) among the most dominant members indicates a taxonomic selection of members of the stable bacterial community. In parallel, host‐specific plasmid patterns could also be, independently, related to the assembly of members of the coral microbiome.
机译:尽管珊瑚微生物组对于全生命周期的持久性很重要,但是它们之间的相互作用还没有被很好地理解。特别是,缺乏对微生物核心特定成员的共现和分类学重要性以及特定移动遗传元件(MGE)模式的了解。我们使用了从巴西巴伊亚州两个珊瑚礁上的Mussismilia hispida菌落收集的海水和黏液样本,以弄清它们相关的细菌群落,紫杉间的相关性和质粒模式。筛选了两个广谱宿主(BHR)质粒组IncP-1β和PromA的代理。两组的珊瑚黏液含量均明显高于海水(分别高达252和100%)。值得注意的是,仅在珊瑚粘液样本中检测到PromA质粒组。纤溶酶原菌的核心细菌组主要由变形杆菌的成员组成,其次是Firmicutes。检测到显性宿主的不同组之间(例如芽孢杆菌科和假单胞菌科以及假单胞菌属,芽孢杆菌和弧菌属)有明显的宿主特异性和共现。在最丰富的门和细菌组核心中都观察到了这些关系,其中大多数操作分类单位都显示了类间相关性。在最主要成员中观察到的宿主特异性细菌组和共生(以及潜在的共生或小生境空间共性)证据表明,对稳定细菌群落成员进行了分类选择。同时,宿主特异性质粒模式也可能独立地与珊瑚微生物组成员的组装有关。

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