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首页> 外文期刊>Ecology and Evolution >MicroWeaR: A new R package for dental microwear analysis
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MicroWeaR: A new R package for dental microwear analysis

机译:MicroWeaR:用于牙科微磨损分析的新型R包

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Mastication of dietary items with different mechanical properties leaves distinctive microscopic marks on the surface of tooth enamel. The inspection of such marks (dental microwear analysis) is informative about the dietary habitus in fossil as well as in modern species. Dental microwear analysis relies on the morphology, abundance, direction, and distribution of these microscopic marks. We present a new freely available software implementation, MicroWeaR , that, compared to traditional dental microwear tools, allows more rapid, observer error free, and inexpensive quantification and classification of all the microscopic marks (also including for the first time different subtypes of scars). Classification parameters and graphical rendering of the output are fully settable by the user. MicroWeaR includes functions to (a) sample the marks, (b) classify features into categories as pits or scratches and then into their respective subcategories (large pits, coarse scratches, etc.), (c) generate an output table with summary information, and (d) obtain a visual surface‐map where marks are highlighted. We provide a tutorial to reproduce the steps required to perform microwear analysis and to test tool functionalities. Then, we present two case studies to illustrate how MicroWeaR works. The first regards a Miocene great ape obtained from through environmental scanning electron microscope, and other a Pleistocene cervid acquired by a stereomicroscope.
机译:机械性质不同的饮食的咀嚼会在牙釉质表面留下明显的微观标记。对此类标记的检查(牙齿微磨损分析)有助于了解化石以及现代物种中的饮食习性。牙齿微磨损分析取决于这些微观标记的形态,丰度,方向和分布。我们提供了一种新的免费提供的软件实现MicroWeaR,与传统的牙科微磨损工具相比,它可以更快速,无观察者错误,并且对所有微观标记进行廉价的量化和分类(还包括首次包括疤痕的不同亚型) 。用户可以完全设置分类参数和输出的图形表示。 MicroWeaR包含以下功能:(a)对标记进行采样;(b)将特征分类为凹痕或划痕,然后再分类为各自的子类别(大凹痕,粗划痕等);(c)生成包含摘要信息的输出表, (d)获得标记突出显示的可视表面图。我们提供了一个教程,以重现执行微磨损分析和测试工具功能所需的步骤。然后,我们提供两个案例研究来说明MicroWeaR的工作原理。第一个是通过环境扫描电子显微镜获得的中新世大猿,以及其他通过立体显微镜获得的更新世的宫颈。

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