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Prevalence and molecular characteristics of emmcr-1/em gene in emSalmonella typhimurium/em in a tertiary hospital of Zhejiang Province

机译:浙江省三级医院鼠伤寒沙门氏菌 mcr-1 基因的流行及其分子特征

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Objectives: mcr-1 gene has been widely reported in the world. This study aimed to analyze the prevalence and molecular characteristics of mcr-1 gene in Salmonella typhimurium from Quzhou People’s Hospital. Materials and methods: A total of 62 S . typhimurium isolates were isolated and preserved in our laboratory from 2007 to 2016. PCR was used to screen plasmid-mediated colistin resistance gene, mcr-1 . For mcr-1 -positive isolates, susceptibilities to colistin and other antibiotics were assessed using broth microdilution or agar dilution methods. The genetic location of mcr-1 was determined by analysis of pulsed-field gel electrophoresis profiles of S1-digested genomic DNA and subsequent Southern blot hybridization. The multi-locus sequence type and other drug resistance genes found in the mcr-1 -positive isolates were analyzed by performing whole genome sequencing. Genetic environment of mcr-1 gene was analyzed by RAST and Easyfig. Results: A total of three S . typhimurium isolates were identified to be mcr-1 positive, with the prevalence rate of 4.8% (3/62). The minimum inhibitory concentration values of colistin for all these isolates were 8 μg/mL. The three mcr-1 -positive isolates carried mcr-1 gene on two different types of plasmids having the sizes of ~54.7–78.2 kb and 310.1 kb, respectively. All the three isolates belonged to ST34 and carried various resistant genes. Conclusion: Colistin-resistant, mcr-1 -positive S . typhimurium isolates belonging to ST34 have been isolated from Quzhou People’s Hospital. Surveillance needs to be strengthened to identify colistin resistance and prevent the spread of drug-resistant bacteria in the hospital.
机译:目的:mcr-1基因已被世界广泛报道。本研究旨在分析Qu州市人民医院鼠伤寒沙门氏菌中mcr-1基因的流行及其分子特征。材料和方法:总共62 S。鼠伤寒沙门氏菌分离株于2007年至2016年在我们的实验室中分离并保存。PCR用于筛选质粒介导的大肠菌素抗性基因mcr-1。对于mcr-1阳性分离株,使用肉汤微量稀释或琼脂稀释法评估对粘菌素和其他抗生素的敏感性。 mcr-1的遗传位置是通过分析S1消化的基因组DNA的脉冲场凝胶电泳图谱和随后的Southern印迹杂交来确定的。通过执行全基因组测序分析了在mcr-1阳性分离物中发现的多基因座序列类型和其他耐药基因。通过RAST和Easyfig分析了mcr-1基因的遗传环境。结果:总共三个S。鼠伤寒沙门氏菌分离株被鉴定为mcr-1阳性,患病率为4.8%(3/62)。所有这些分离物的大肠菌素最小抑菌浓度值为8μg/ mL。这三个mcr-1阳性分离株在两种不同类型的质粒上分别携带mcr-1基因,大小分别为〜54.7–78.2 kb和310.1 kb。这三个分离株均属于ST34,并携带各种抗性基因。结论:耐共利斯汀,mcr-1阳性S。属于ST34的鼠伤寒分离株已从Qu州人民医院分离出来。需要加强监视以识别大肠菌素耐药性并防止耐药菌在医院中传播。

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