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Quantitative Analysis of Pathway Enrichment within Faba Bean Seeds RNA-Seq (&i&Vicia faba&/i& L)

机译:蚕豆种子RNA-Seq(i Vicia faba / i L)中途径富集的定量分析

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Faba bean ( Vicia faba L) seeds are an important source of plant protein for humans and animals. A total of 15 , 697 Differentially Expressed Genes (DEGs) with pathway annotation were discovered in RNA-Seq of the faba bean seeds. A total of 75 significant KEGG pathways abundance were discovered and 9 pathways were conserved within all genotypes. 41 significant pathways were found to be partially conserved within comparisons of 2 to 6 pairs of genotypes and 25 significant pathways were unique to single pairs of genotypes. There were 8 specific significant pathways discovered related to the faba bean seed Hydration Capacity trait and 9 specific significant pathways discovered related to the PSbMV seeds staining trait. The DEGs demonstrated the genetic distance between these varieties was confirmed by the breeding pedigree selection information and a PCA graph clearly illustrated the genetic distance within these genotypes.
机译:蚕豆(蚕豆)是人类和动物重要的植物蛋白来源。在蚕豆种子的RNA-Seq中发现了总共15 697个带有途径注释的差异表达基因(DEG)。总共发现了75条重要的KEGG途径丰度,并且在所有基因型中保守了9条途径。在2至6对基因型的比较中,发现41条重要途径被部分保留,而25对重要途径是单对基因型所独有的。发现了与蚕豆种子水合能力性状相关的8个特异性显着途径,以及与PSbMV种子染色性状相关的9个特异性显着途径。 DEGs通过育种谱系选择信息证实了这些品种之间的遗传距离,PCA图清楚地说明了这些基因型内的遗传距离。

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