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A Simulation System for Computational Cell Models Based on Object-Oriented Design Patterns

机译:基于面向对象设计模式的计算单元模型仿真系统

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Reconstruction of biophysically detailed computer models for simulating electrical activities of heart cells provides a powerful tool to systematically investigate the ionic mechanisms underlying the genesis and control of cardiac rhythms. However, the fact that there is no unified or standard architecture for computational cell models, which were built by different research groups with specific purposes, obstructed profound applications of these models. In this study, we employed object-oriented design patterns to redesign and reconstitute the cell models and provided a more flexible, portable, and expansible infrastructure for modeling computational cell models. Meanwhile, using the proposed methods, a simulation platform has been developed for electrical activities of cell models with aims to offer a user-friendly interface to study the electrical activities of cardiac cells under various physiological and pathological conditions. Both the proposed design methods and the developed system were validated and effective by testing several typical cell models.
机译:用于模拟心脏细胞电活动的生物物理详细计算机模型的重建提供了强大的工具,可以系统地研究心律发生和控制的离子机制。但是,由于没有由不同研究小组针对特定目的构建的计算单元模型统一或标准架构,这一事实阻碍了这些模型的广泛应用。在这项研究中,我们采用了面向对象的设计模式来重新设计和重构单元格模型,并为建模计算单元格模型提供了更加灵活,可移植和可扩展的基础架构。同时,使用提出的方法,已经开发了用于细胞模型的电活动的仿真平台,旨在提供用户友好的界面来研究在各种生理和病理条件下心脏细胞的电活动。通过测试几种典型的细胞模型,验证了所提出的设计方法和所开发的系统的有效性。

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