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Assessment of bacterial endosymbiont diversity in Otiorhynchus spp. (Coleoptera: Curculionidae) larvae using a multitag 454 pyrosequencing approach

机译:Otiorhynchus spp中细菌内共生体多样性的评估。 (鞘翅目:Curculionidae)幼虫使用多标签454焦磷酸测序方法

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Weevils of the genus Otiorhynchus are regarded as devastating pests in a wide variety of horticultural crops worldwide. So far, little is known on the presence of endosymbionts in Otiorhynchus spp.. Investigation of endosymbiosis in this genus may help to understand the evolution of different reproductive strategies in these weevils (parthenogenesis or sexual reproduction), host-symbiont interactions, and may provide a future basis for novel pest management strategy development. Here, we used a multitag 454 pyrosequencing approach to assess the bacterial endosymbiont diversity in larvae of four economically important Otiorhynchus species. High-throughput tag-encoded FLX amplicon pyrosequencing of a bacterial 16S rDNA fragment was used to characterise bacterial communities associated with different Otiorhynchus spp. larvae. By sequencing a total of ~48,000 PCR amplicons, we identified 49 different operational taxonomic units (OTUs) as bacterial endosymbionts in the four studied Otiorhynchus species. More than 90% of all sequence reads belonged either to the genus Rickettsia or showed homology to the phylogenetic group of “Candidatus Blochmannia” and to endosymbionts of the lice Pedicinus obtusus and P. badii. By using specific primers for the genera Rickettsia and “Candidatus Blochmannia”, we identified a new phylogenetic clade of Rickettsia as well as “Candidatus Nardonella” endosymbionts in Otiorhynchus spp. which are closely related to “Candidatus Blochmannia” bacteria. Here, we used multitag 454 pyrosequencing for assessment of insect endosymbiotic communities in weevils. As 454 pyrosequencing generates only quite short sequences, results of such studies can be regarded as a first step towards identifying respective endosymbiotic species in insects. In the second step of our study, we analysed sequences of specific gene regions for a more detailed phylogeny of selected endosymbiont genera. As a result we identified the presence of Rickettsia and “Candidatus Nardonella” endosymbionts in Otiorhynchus spp.. This knowledge is an important step in exploring bacteria-insect associations for potential use in insect pest control.
机译:Otiorhynchus属的象鼻虫被认为是全世界各种园艺作物中的毁灭性害虫。到目前为止,关于内生共生体在Otiorhynchus spp中的知之甚少。对该属内生共生体的研究可能有助于了解这些象鼻虫(单性生殖或有性生殖)中不同生殖策略的进化,宿主-共生体相互作用,并可能提供新型有害生物管理战略发展的未来基础。在这里,我们使用了多标签454焦磷酸测序方法来评估四种经济上重要的Otiorhynchus物种的幼虫中细菌共生共生体的多样性。高通量标签编码的细菌16S rDNA片段的FLX扩增子焦磷酸测序用于表征与不同Otiorhynchus spp相关的细菌群落。幼虫。通过对总共约48,000个PCR扩增子进行测序,我们在四个研究的Otiorhynchus物种中鉴定出49个不同的操作分类单位(OTU)作为细菌内共生体。所有序列读数的90%以上属于立克次氏菌属,或与“ Bandmanus Blochmannia”的系统发育组以及虱子Pedicinus obtusus和P. badii的内共生体同源。通过使用立克次体和“ Candidatus Blochmannia”属的特异性引物,我们在Otiorhynchus spp中鉴定了新的立克次体和“ Candidatus Nardonella”内共生体进化枝。与“念珠菌”密切相关。在这里,我们使用多标签454焦磷酸测序来评估象鼻虫中的昆虫共生共生群落。由于454焦磷酸测序仅产生很短的序列,因此这些研究的结果可以看作是鉴定昆虫各自内共生物种的第一步。在我们研究的第二步中,我们分析了特定基因区域的序列,以更详细地了解选定的共生菌属的系统发育。结果,我们确定了Otiorhynchus spp。中存在立克次体和“纳豆氏弧菌”内共生菌。该知识是探索细菌-昆虫协会潜在用于害虫防治的重要步骤。

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