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Estimation of genetic parameters and detection of quantitative trait loci for minerals in Danish Holstein and Danish Jersey milk

机译:丹麦荷斯坦奶和丹麦泽西奶中矿物质的遗传参数估计和数量性状位点的检测

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Background Bovine milk provides important minerals, essential for human nutrition and dairy product quality. For changing the mineral composition of the milk to improve dietary needs in human nutrition and technological properties of milk, a thorough understanding of the genetics underlying milk mineral contents is important. Therefore the aim of this study was to 1) estimate the genetic parameters for individual minerals in Danish Holstein (DH) (n?=?371) and Danish Jersey (DJ) (n?=?321) milk, and 2) detect genomic regions associated with mineral content in the milk using a genome-wide association study (GWAS) approach. Results For DH, high heritabilities were found for Ca (0.72), Zn (0.49), and P (0.46), while for DJ, high heritabilities were found for Ca (0.63), Zn (0.57), and Mg (0.57). Furthermore, intermediate heritabilities were found for Cu in DH, and for K, Na, P and Se in the DJ. The GWAS revealed a total of 649 significant SNP markers detected for Ca (24), Cu (90), Fe (111), Mn (3), Na (1), P (4), Se (12) and Zn (404) in DH, while for DJ, a total of 787 significant SNP markers were detected for Ca (44), Fe (43), K (498), Na (4), Mg (1), P (94) and Zn (3). Comparing the list of significant markers between DH and DJ revealed that the SNP ARS-BFGL-NGS-4939 was common in both breeds for Zn. This SNP marker is closely linked to the DGAT1 gene. Even though we found significant SNP markers on BTA14 in both DH and DJ for Ca, and Fe these significant SNPs did not overlap. Conclusion The results show that Ca, Zn, P and Mg show high heritabilities. In combination with the GWAS results this opens up possibilities to select for specific minerals in bovine milk.
机译:背景技术牛乳提供重要的矿物质,对人体营养和乳制品质量至关重要。为了改变牛奶中的矿物质成分,以改善人类对牛奶的营养和技术特性的饮食需求,全面了解牛奶中矿物质含量的遗传学非常重要。因此,本研究的目的是:1)估计丹麦荷斯坦奶(DH)(n?=?371)和丹麦泽西岛(DJ)(n?=?321)牛奶中单个矿物质的遗传参数,以及2)检测基因组使用全基因组关联研究(GWAS)方法与牛奶中矿物质含量相关的区域。结果对于DH,发现Ca(0.72),Zn(0.49)和P(0.46)的高遗传力,而对于DJ,发现Ca(0.63),Zn(0.57)和Mg(0.57)的高遗传力。此外,在DH中发现了Cu的中等遗传力,在DJ中发现了K,Na,P和Se的中等遗传力。 GWAS揭示了针对钙(24),铜(90),铁(111),锰(3),钠(1),磷(4),硒(12)和锌(404)总共检测到的649个重要SNP标记),但在DJ中,共检测到787种重要的SNP标记,包括Ca(44),Fe(43),K(498),Na(4),Mg(1),P(94)和Zn( 3)。比较DH和DJ之间的重要标记列表,发现SNP ARS-BFGL-NGS-4939在两种锌中都很常见。该SNP标记与DGAT1基因紧密相连。即使我们在DH和DJ中的Ca和Fe的BTA14上都发现了重要的SNP标记,这些重要的SNP也没有重叠。结论结果表明,Ca,Zn,P和Mg具有较高的遗传力。与GWAS结果结合使用,可以选择牛乳中的特定矿物质。

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