首页> 外文期刊>BMC Medical Genetics >A comprehensive analysis of common genetic variation in prolactin (PRL) and PRL receptor (PRLR) genes in relation to plasma prolactin levels and breast cancer risk: the Multiethnic Cohort
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A comprehensive analysis of common genetic variation in prolactin (PRL) and PRL receptor (PRLR) genes in relation to plasma prolactin levels and breast cancer risk: the Multiethnic Cohort

机译:催乳素(PRL)和PRL受体(PRLR)基因的常见遗传变异与血浆催乳素水平和乳腺癌风险的综合分析:多种族队列

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Background Studies in animals and humans clearly indicate a role for prolactin (PRL) in breast epithelial proliferation, differentiation, and tumorigenesis. Prospective epidemiological studies have also shown that women with higher circulating PRL levels have an increase in risk of breast cancer, suggesting that variability in PRL may also be important in determining a woman's risk. Methods We evaluated genetic variation in the PRL and PRL receptor (PRLR) genes as predictors of plasma PRL levels and breast cancer risk among African-American, Native Hawaiian, Japanese-American, Latina, and White women in the Multiethnic Cohort Study (MEC). We selected single nucleotide polymorphisms (SNPs) from both the public (dbSNP) and private (Celera) databases to construct high density SNP maps that included up to 20 kilobases (kb) upstream of the transcription initiation site and 10 kb downstream of the last exon of each gene, for a total coverage of 59 kb in PRL and 210 kb in PRLR. We genotyped 80 SNPs in PRL and 173 SNPs in PRLR in a multiethnic panel of 349 unaffected subjects to characterize linkage disequilibrium (LD) and haplotype patterns. We sequenced the coding regions of PRL and PRLR in 95 advanced breast cancer cases (19 of each racial/ethnic group) to uncover putative functional variation. A total of 33 and 60 haplotype "tag" SNPs (tagSNPs) that allowed for high predictability (Rh2 ≥ 0.70) of the common haplotypes in PRL and PRLR, respectively, were then genotyped in a multiethnic breast cancer case-control study of 1,615 invasive breast cancer cases and 1,962 controls in the MEC. We also assessed the association of common genetic variation with circulating PRL levels in 362 postmenopausal controls without a history of hormone therapy use at blood draw. Because of the large number of comparisons being performed we used a relatively stringent type I error criteria (p Results We observed no significant associations between PRL and PRLR haplotypes or individual SNPs in relation to breast cancer risk. A nominally significant association was noted between prolactin levels and a tagSNP (tagSNP 44, rs2244502) in intron 1 of PRL. This SNP showed approximately a 50% increase in levels between minor allele homozygotes vs. major allele homozygotes. However, this association was not significant (p = 0.002) using our type I error criteria to correct for multiple testing, nor was this SNP associated with breast cancer risk (p = 0.58). Conclusion In this comprehensive analysis covering 59 kb of the PRL locus and 210 kb of the PRLR locus, we found no significant association between common variation in these candidate genes and breast cancer risk or plasma PRL levels. The LD characterization of PRL and PRLR in this multiethnic population provide a framework for studying these genes in relation to other disease outcomes that have been associated with PRL, as well as for larger studies of plasma PRL levels.
机译:在动物和人类中进行的背景研究清楚地表明,催乳激素(PRL)在乳腺上皮增殖,分化和肿瘤发生中的作用。流行病学前瞻性研究还表明,循环PRL水平较高的女性患乳腺癌的风险增加,这表明PRL的变异性对于确定女性的风险也可能很重要。方法在多种族队列研究(MEC)中,我们评估了PRL和PRL受体(PRLR)基因的遗传变异,作为非洲裔美国人,夏威夷原住民,日本裔美国人,拉丁裔和白人女性血浆PRL水平和乳腺癌风险的预测指标。我们从公共数据库(dbSNP)和私有数据库(Celera)中选择了单核苷酸多态性(SNP),以构建高密度SNP图谱,该图谱包括转录起始位点上游20 kb(kb)和最后一个外显子下游10 kb。每个基因的总覆盖范围为PRL 59 kb,PRLR 210 kb。我们对349个未受影响的受试者进行了多族裔分型,对PRL中的80个SNP和PRLR中的173个SNP进行了基因分型,以表征连锁不平衡(LD)和单倍型模式。我们对95例晚期乳腺癌病例(每个种族/族裔中的19个)的PRL和PRLR编码区进行了测序,以发现推定的功能变异。共有33个和60个单倍型“标记” SNP(tagSNP),分别允许PRL和PRLR中的常见单倍型具有较高的可预测性(R h 2 ≥0.70) ,然后在多种族乳腺癌病例对照研究中对MEC中的1,615例浸润性乳腺癌病例和1,962例对照进行基因分型。我们还评估了362名绝经后无抽血激素治疗史的普通遗传变异与循环PRL水平的关系。由于进行了大量比较,因此我们使用了相对严格的I型错误标准(p结果我们发现PRL和PRLR单倍型或单个SNP与乳腺癌风险之间无显着相关性。催乳素水平之间存在名义上显着的相关性。以及PRL内含子1中的tagSNP(tagSNP 44,rs2244502),该SNP显示次要等位基因纯合子与主要等位基因纯合子之间的水平增加了约50%,但是,使用我们的类型,这种关联并不显着(p = 0.002)我错误地校正了多项检测的标准,而且该SNP也与乳腺癌风险无关(p = 0.58)结论在对59 kb的PRL基因座和210 kb的PRLR基因座进行的全面分析中,我们发现两者之间无显着相关性这些候选基因的常见变异以及罹患乳腺癌的风险或血浆PRL水平。在该多族裔人群中PRL和PRLR的LD特征提供了研究这些基因与PRL相关的其他疾病结局的方法,以及对血浆PRL水平的更大研究。

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