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Establishment of a RT-lamp method for the rabbit hemorrhagic disease virus detection

机译:RT-lamp方法检测兔出血性疾病病毒的建立

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To develop a new molecular biological method for the quick detection of rabbit hemorrhagic disease virus (RHDV), a set of 7 primerswere designed according to the conserved sequence of the capsid proteinVP60gene of RHDV published inGenBank, and the reverse transcriptase loop-mediated isothermal amplification (RT-LAMP) assay was established through preparation of target gene fragments, optimization of reaction conditions, sensitivity and specificity tests. Results showed the RT-LAMPmethod for the RHDV detection had a ladder-like pattern of amplication bands from about 213 bp incubation at 64oC for 45min by using agarose gel electrophoresis,and with good sensitivity and specificity,the detection limit could reach about 5 copies of cloned viral genomic fragments, which was more sensitve than that of traditional RT-PCR, and no amplifications for gene fragment of European brown hare syndrome virus, Pasteurella multocida, E.coli and Salmonella fromrabbits detection by this RT-LAMP approach.
机译:为了开发一种新的分子生物学方法来快速检测兔出血性疾病病毒(RHDV),根据GenBank中发表的RHDV衣壳蛋白VP60基因的保守序列设计了7个引物,并通过逆转录酶环介导的等温扩增(通过制备目标基因片段,优化反应条件,灵敏度和特异性测试,建立了RT-LAMP)检测方法。结果表明,用于RHDV检测的RT-LAMP方法在琼脂糖凝胶电泳中于64°C孵育213 bp约45 min时具有约213 bp的扩增条带状梯形图谱,且灵敏度和特异性均良好,检出限可达约5拷贝克隆的病毒基因组片段比传统的RT-PCR更加敏感,并且通过这种RT-LAMP方法从兔子检测到的欧洲棕兔综合症病毒,多杀巴斯德氏菌,大肠杆菌和沙门氏菌的基因片段没有扩增。

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