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Super-Resolution Image Reconstruction for High-Density Three-Dimensional Single-Molecule Microscopy

机译:高密度三维单分子显微镜的超分辨率图像重建

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摘要

Single-molecule localization based super-resolution microscopy, by localizing a sparse subset of stochastically activated emitters in each frame, achieves subdiffraction-limit spatial resolution. Its temporal resolution, however, is constrained by the maximal density of activated emitters that can be successfully reconstructed. The state-of-the-art three-dimensional (3-D) reconstruction algorithm based on compressed sensing suffers from high computational complexity and gridding error due to model mismatch. In this paper, we propose a novel super-resolution algorithm for 3-D image reconstruction, dubbed TVSTORM, which promotes the sparsity of activated emitters without discretizing their locations. Several strategies are pursued to improve the reconstruction quality under the Poisson noise model, and reduce the computational time by an order-of-magnitude. Numerical results on both simulated and cell imaging data are provided to validate the favorable performance of the proposed algorithm.
机译:通过在每个帧中定位随机激活的发射器的稀疏子集,基于单分子定位的超分辨率显微镜可以实现亚衍射极限空间分辨率。然而,其时间分辨率受到可以成功重建的激活发射器的最大密度的限制。基于压缩感测的最新的三维(3-D)重建算法由于模型不匹配而具有较高的计算复杂性和网格化误差。在本文中,我们提出了一种新颖的用于3D图像重建的超分辨率算法,称为TVSTORM,该算法可提高激活的发射器的稀疏度,而不会离散其位置。为了在Poisson噪声模型下提高重建质量,并将计算时间减少一个数量级,采取了几种策略。提供了模拟和细胞成像数据的数值结果,以验证所提出算法的良好性能。

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