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Comparative analysis of transcriptional responses to saline stress in the laboratory and brewing strains of Saccharomyces cerevisiae with DNA microarray

机译:DNA微阵列技术对酿酒酵母实验室和酿造菌株对盐胁迫的转录反应的比较分析

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摘要

To construct yeast strains showing tolerance to high salt concentration stress, we analyzed the transcriptional response to high NaCl concentration stress in the yeast Saccharomyces cerevisiae using DNA microarray and compared between two yeast strains, a laboratory strain and a brewing one, which is known as a stress-tolerant strain. Gene expression dynamically changed following the addition of NaCl in both yeast strains, but the degree of change in the gene expression level in the laboratory strain was larger than that in the brewing strain. The response of gene expression to the low NaCl concentration stress was faster than that to the high NaCl concentration stress in both strains. Expressions of the genes encoding enzymes involved in carbohydrate metabolism and energy production in both strains or amino acid metabolism in the brewing strain were increased under high NaCl concentration conditions. Moreover, the genes encoding sodium ion efflux pump and copper metallothionein proteins were more highly expressed in the brewing strain than in the laboratory strain. According to the results of transcriptome analysis, candidate genes for the creation of stress-tolerant strain were selected, and the effect of overexpression of candidate genes on the tolerance to high NaCl concentration stress was evaluated. Overexpression of the GPD1 gene encoding glycerol-3-phosphate dehydrogenase, ENA1 encoding sodium ion efflux protein, and CUP1 encoding copper metallothionein conferred high salt stress tolerance to yeast cells, and our selection of candidate genes for the creation of stress-tolerant yeast strains based on the transcriptome data was validated.
机译:为了构建对高盐浓度胁迫具有耐受性的酵母菌株,我们使用DNA微阵列芯片分析了酿酒酵母中对高NaCl浓度胁迫的转录反应,并比较了两种酵母菌株,实验室菌株和酿造菌株,这就是一种耐压力应变。在两个酵母菌株中加入NaCl后,基因表达都动态变化,但是实验室菌株中基因表达水平的变化程度要比酿造菌株中的大。在两种菌株中,基因表达对低NaCl浓度胁迫的响应均快于对高NaCl浓度胁迫的响应。在高NaCl浓度条件下,两种菌株中编码碳水化合物代谢和能量产生的酶或酿造菌株中氨基酸代谢的酶的基因表达增加。此外,与实验室菌株相比,在酿造菌株中编码钠离子外排泵和铜金属硫蛋白的基因的表达更高。根据转录组分析的结果,选择产生耐胁迫菌株的候选基因,并评估候选基因的过表达对高NaCl浓度胁迫耐受性的影响。编码3-磷酸甘油脱氢酶的GPD1基因,编码钠离子外排蛋白的ENA1和编码铜金属硫蛋白的CUP1的过表达赋予了酵母细胞高盐胁迫耐受性,我们选择了候选基因来创建基于胁迫的酵母菌株在转录组上的数据已得到验证。

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  • 来源
    《Applied Microbiology and Biotechnology》 |2006年第3期|346-357|共12页
  • 作者单位

    Department of Biotechnology Graduate School of Engineering Osaka UniversityInstitute for Advanced Biosciences Keio University;

    Department of Biotechnology Graduate School of Engineering Osaka University;

    Department of Bioinformatic Engineering Graduate School of Information Science and Technology Osaka University;

    Department of Biotechnology Graduate School of Engineering Osaka University;

    Department of Bioinformatic Engineering Graduate School of Information Science and Technology Osaka University;

    Department of Bioinformatic Engineering Graduate School of Information Science and Technology Osaka University;

    Department of Biotechnology Graduate School of Engineering Osaka University;

    Department of Bioinformatic Engineering Graduate School of Information Science and Technology Osaka University;

    Department of Biotechnology Graduate School of Engineering Osaka University;

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