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Simulation of bright-field microscopy images depicting pap-smear specimen

机译:描绘子宫颈涂片标本的明场显微镜图像的模拟

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摘要

As digital imaging is becoming a fundamental part of medical and biomedical research, the demand for computer-based evaluation using advanced image analysis is becoming an integral part of many research projects. A common problem when developing new image analysis algorithms is the need of large datasets with ground truth on which the algorithms can be tested and optimized. Generating such datasets is often tedious and introduces subjectivity and interindividual and intraindividual variations. An alternative to manually created ground-truth data is to generate synthetic images where the ground truth is known. The challenge then is to make the images sufficiently similar to the real ones to be useful in algorithm development. One of the first and most widely studied medical image analysis tasks is to automate screening for cervical cancer through Pap-smear analysis. As part of an effort to develop a new generation cervical cancer screening system, we have developed a framework for the creation of realistic synthetic bright-field microscopy images that can be used for algorithm development and benchmarking. The resulting framework has been assessed through a visual evaluation by experts with extensive experience of Pap-smear images. The results show that images produced using our described methods are realistic enough to be mistaken for real microscopy images. The developed simulation framework is very flexible and can be modified to mimic many other types of bright-field microscopy images. © 2015 The Authors. Published by Wiley Periodicals, Inc. on behalf of ISAC
机译:随着数字成像已成为医学和生物医学研究的基础部分,使用高级图像分析进行基于计算机的评估的需求已成为许多研究项目不可或缺的一部分。在开发新的图像分析算法时,一个常见的问题是需要具有基础事实的大型数据集,可以对这些数据集进行测试和优化。生成此类数据集通常很繁琐,并且会引入主观性以及个体间和个体内的变异。手动创建的地面真实数据的替代方法是在已知地面真实情况的情况下生成合成图像。面临的挑战是使图像与真实图像足够相似,以用于算法开发。最早且研究最广泛的医学图像分析任务之一是通过子宫颈抹片涂片分析自动筛查宫颈癌。作为开发新一代宫颈癌筛查系统的一部分,我们已经开发了一个框架,用于创建可用于算法开发和基准测试的逼真的合成明场显微图像。通过对子宫颈抹片图像有丰富经验的专家进行视觉评估,对最终框架进行了评估。结果表明,使用我们描述的方法生成的图像非常真实,可以被误认为是真实的显微镜图像。所开发的仿真框架非常灵活,可以修改以模仿许多其他类型的明场显微图像。 ©2015作者。由Wiley Periodicals,Inc.代表ISAC发布

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