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Segregation of point mutation heteroplasmy in the control region of dog mtDNA studied systematically in deep generation pedigrees

机译:在深系谱系中系统研究了狗mtDNA控制区域中点突变异质的分离

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摘要

Heteroplasmy, the presence of two or more variants in an organism, may render mitochondrial DNA (mtDNA)-based individual identification challenging in forensic analysis. However, the variation of heteroplasmic proportions and the segregation of heteroplasmic variants through generations and within families have not been systematically described at a large scale in animals such as the domestic dog. Therefore, we performed the largest study to date in domestic dogs and screened a 582-bp-long fragment of the mtDNA control region in 180 individuals in 58 pedigrees for signs of heteroplasmy. We identified three pedigrees (5.17%) with heteroplasmic point mutations. To follow the segregation of the point mutations, we then analyzed 131 samples from these three independent pedigrees and found significant differences in heteroplasmy between generations and among siblings. Frequently (10% of cases), the proportion of one base changed from 0–10% to 80–90% (as judged from Sanger electropherograms) between generations and varied to a similar extent among siblings. We included also a literature review of heteroplasmic and potential mutational hot spot positions in the studied region which showed that all heteroplasmic positions appear to be mutational hot spots. Thus, although heteroplasmy may be used to increase the significance of a match in forensic case work, it may also cause erroneous exclusion of related individuals because of sharp switches from one state to the other within a single generation or among siblings especially in the presented mutational hot spots.Electronic supplementary materialThe online version of this article (doi:10.1007/s00414-010-0524-7) contains supplementary material, which is available to authorized users.
机译:异质性(在生物体中存在两个或多个变体)可能会使基于线粒体DNA(mtDNA)的个体识别在法医分析中具有挑战性。然而,在诸如家犬的动物中,尚未系统地大规模描述异质比例的变化和异质变体在世代之间和在家庭内的分离。因此,我们对家犬进行了迄今为止最大的研究,并在58个家系中的180个个体中筛选了582 bp长的mtDNA控制区片段,寻找异质性体征。我们确定了三个带有异质点突变的谱系(5.17%)。为了追踪点突变的分离,我们随后分析了这三个独立谱系中的131个样本,发现世代之间和兄弟姐妹之间的异质性存在显着差异。通常情况下(占病例的10%),一个碱基的比例在几代人之间从0-10%变为80-90%(根据桑格电泳图判断),并且在兄弟姐妹之间变化幅度相似。我们还包括对研究区域中的异质和潜在突变热点位置的文献综述,该研究表明所有异质位置似乎都是突变热点。因此,尽管异质性可用于提高法医案例研究中匹配的重要性,但由于一代人或同胞之间从一种状态到另一种状态的急剧转换,特别是在所呈现的突变中,它也可能导致相关个体的错误排除。电子补充材料本文的在线版本(doi:10.1007 / s00414-010-0524-7)包含补充材料,授权用户可以使用。

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