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A response surface optimization approach to adjust ionic current conductances of cardiac electrophysiological models. Application to the study of potassium level changes

机译:响应表面优化方法,可调节心脏电生理模型的离子电流电导。在钾水平变化研究中的应用

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摘要

Cardiac electrophysiological computational models are often developed from previously published models. The new models may incorporate additional features to adapt the model to a different species or may upgrade a specific ionic formulation based on newly available experimental data. A relevant challenge in the development of a new model is the estimation of certain ionic current conductances that cannot be reliably identified from experiments. A common strategy to estimate those conductances is by means of constrained non-linear least-squares optimization. In this work, a novel methodology is proposed for estimation of ionic current conductances of cardiac electrophysiological models by using a response surface approximation-based constrained optimization with trust region management. Polynomial response surfaces of a number of electrophysiological markers were built using statistical sampling methods. These markers included action potential duration (APD), triangulation, diastolic and systolic intracellular calcium concentration, and time constants of APD rate adaptation. The proposed methodology was applied to update the Carro et al. human ventricular action potential model after incorporation of intracellular potassium ([K+]i) dynamics. While the Carro et al. model was well suited for investigation of arrhythmogenesis, it did not allow simulation of [K+]i changes. With the methodology proposed in this study, the updated Carro et al. human ventricular model could be used to simulate [K+]i changes in response to varying extracellular potassium ([K+]o) levels. Additionally, it rendered values of evaluated electrophysiological markers within physiologically plausible ranges. The optimal values of ionic current conductances in the updated model were found in a notably shorter time than with previously proposed methodologies. As a conclusion, the response surface optimization-based approach proposed in this study allows estimating ionic current conductances of cardiac electrophysiological computational models while guaranteeing replication of key electrophysiological features and with an important reduction in computational cost with respect to previously published approaches. The updated Carro et al. model developed in this study is thus suitable for the investigation of arrhythmic risk-related conditions, including those involving large changes in potassium concentration.
机译:心脏电生理计算模型通常是根据以前发表的模型开发的。新模型可能包含其他功能,以使模型适应不同的物种,或者可以基于新获得的实验数据升级特定的离子制剂。新模型开发中的一个相关挑战是无法从实验中可靠地确定某些离子电流电导的估算。估计这些电导的常用策略是通过约束非线性最小二乘法优化。在这项工作中,提出了一种新颖的方法,该方法通过使用基于响应表面近似的约束优化和信任区域管理来估计心脏电生理模型的离子电流电导。使用统计采样方法构建了许多电生理标记的多项式响应面。这些标记包括动作电位持续时间(APD),三角测量,舒张期和收缩期细胞内钙浓度以及APD速率适应的时间常数。所提出的方法被用于更新Carro等人。细胞内钾([K + ] i)动力学结合后的人心室动作电位模型。而卡罗等。该模型非常适合调查心律失常,它无法模拟[K + ] i的变化。随着这项研究中提出的方法,更新的卡罗等。人脑室模型可用于模拟[K + ] i对细胞外钾([K + ] o)水平变化的响应。另外,它使评估的电生理标记物的值在生理上合理的范围内。与以前提出的方法相比,在更新的模型中发现离子电流电导的最佳值的时间明显短得多。结论是,本研究中提出的基于响应面优化的方法可以估算心脏电生理计算模型的离子电导率,同时保证关键的电生理特征的复制,并且相对于以前发布的方法,可以显着降低计算成本。更新的Carro等人。因此,本研究开发的模型适用于研究与心律失常相关的疾病,包括钾浓度变化较大的疾病。

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