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Matrix Metalloproteinase-1 (MMP-1) Promoter Polymorphisms are Well Linked with Lower Stomach Tumor Formation in Eastern Indian Population

机译:基质金属蛋白酶-1(MMP-1)启动子多态性与东部印度人口的下胃肿瘤形成密切相关

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摘要

Expression of matrix metalloproteinase-1 (MMP-1), an interstitial collagenase, plays a major role in cellular invasion during development of gastric cancer, a leading cause of death worldwide. A single-nucleotide polymorphism (SNP) −1607 1G/2G site of the MMP-1 gene promoter has been reported to alter transcription level. While the importance’s of other SNPs in the MMP-1 promoter have not yet been studied in gastric cancer, our aim was to investigate MMP-1 gene promoter polymorphisms and gastric cancer susceptibility in eastern Indian population. A total of 145 gastric cancer patients and 145 healthy controls were genotyped for MMP-1 −1607 1G/2G (rs1799750) by PCR-restriction fragment length polymorphism (RFLP), while MMP-1 −519 A/G (rs1144393), MMP-1 −422 T/A (rs475007), MMP-1 −340 T/C (rs514921) and MMP-1 −320 T/C (rs494379) were genotyped by DNA sequencing. A positive association was found with MMP-1 −422 T/A SNP that showed significant risk for regional lymph node metastasis (P = 0.021, Odd’s ratio (OR) = 3.044, Confidence intervals (CI) = 1.187–7.807). In addition, we found a significant association with lower stomach tumor formation among gastric cancer patients for three adjacent polymorphisms near the transcriptional start sites of [MMP-1 −422 T/A (P = 0.043, OR = 2.182, CI = 1.03–4.643), MMP-1 −340 T/C (P = 0.075, OR = 1.97, CI = 0.94–4.158) and MMP-1 −320 T/C (P = 0.034, OR = 2.224, CI = 1.064–40731)]. MMP-1 level in patients’ serum was correlated with MMP-1 promoter haplotypes conferring these three SNPs to evaluate the functional importance of these polymorphisms in lower stomach tumor formation and significant correlation was observed. Furthermore, MMP-1 −519 A/G polymorphism displayed poor cellular differentiation (P = 0.024, OR = 3.8, CI = 1.69–8.56) attributing a higher risk of cancer progression. In conclusion, MMP-1 proximal promoter SNPs are associated with the risk of lower stomach tumor formation and node metastasis in eastern Indian population.
机译:基质金属蛋白酶-1(MMP-1)(一种间质胶原酶)的表达在胃癌发展过程中的细胞侵袭中起着重要作用,胃癌是全球范围内的主要死亡原因。据报道,MMP-1基因启动子的单核苷酸多态性(SNP)-1607 1G / 2G位点会改变转录水平。尽管尚未在胃癌中研究其他SNP在MMP-1启动子中的重要性,但我们的目的是研究印度东部人口中MMP-1基因启动子的多态性和胃癌的易感性。通过PCR限制性片段长度多态性(RFLP)对145位胃癌患者和145位健康对照进行MMP-1 -1607 1G / 2G(rs1799750)基因分型,而MMP-1 −519 A / G(rs1144393),MMP基因分型通过DNA测序对-1 -422 T / A(rs475007),MMP-1 -340 T / C(rs514921)和MMP-1 -320 T / C(rs494379)进行基因分型。发现与MMP-1 -422 T / A SNP呈正相关,显示出区域淋巴结转移的显着风险(P = 0.021,奇数比(OR)= 3.044,置信区间(CI)= 1.187-7.807)。此外,我们发现[MMP-1 -422 T / A转录起始位点附近的三个相邻多态性与胃癌患者中较低的胃肿瘤形成显着相关(P = 0.043,OR,= 2.182,CI = 1.03-4.643 ),MMP-1 −340 T / C(P = 0.075,OR = 1.97,CI = 0.94-4.158)和MMP-1 −320 T / C(P = 0.034,OR = 2.224,CI = 1.064–40731)] 。患者血清中的MMP-1水平与赋予这三个SNP的MMP-1启动子单倍型相关,以评估这些多态性在下胃肿瘤形成中的功能重要性,并观察到显着相关性。此外,MMP-1 −519 A / G多态性显示出较差的细胞分化(P = 0.024,OR = 3.8,CI = 1.69-8.56),这说明癌症发展的风险更高。总之,在印度东部人群中,MMP-1近端启动子SNP与降低胃肿瘤形成和结节转移的风险有关。

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