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Cloning of Insertion Site Flanking Sequence and Construction of Transfer DNA Insert Mutant Library in Stylosanthes Colletotrichum

机译:柱花拟南芥插入位点侧翼序列的克隆及DNA插入突变体文库的构建。

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摘要

Stylosanthes sp. is the most important forage legume in tropical areas worldwide. Stylosanthes anthracnose, which is mainly caused by Colletotrichum gloeosporioides, is a globally severe disease in stylo production. Little progress has been made in anthracnose molecular pathogenesis research. In this study, Agrobacterium tumefaciens-mediated transformation was used to transform Stylosanthes colletotrichum strain CH008. The major factors of the genetic transformation system of S. colletotrichum were optimized as follows: A. tumefaciens’ AGL-1 concentration (OD600), 0.8; concentration of Colletotrichum conidium, 1×106 conidia/mL; acetosyringone concentration, 100 mmol/L; induction time, 6 h; co-culture temperature, 25°C; and co-culture time, 3 d. Thus, the transformation efficiency was increased to 300–400 transformants per 106 conidia. Based on the optimized system, a mutant library containing 4616 mutants was constructed, from which some mutants were randomly selected for analysis. Results show that the mutants were single copies that could be stably inherited. The growth rate, spore amount, spore germination rate, and appressorium formation rate in some mutants were significantly different from those in the wild-type strain. We then selected the most appropriate method for the preliminary screening and re-screening of each mutant’s pathogenic defects. We selected 1230 transformants, and obtained 23 strains with pathogenic defects, namely, 18 strains with reduced pathogenicity and five strains with lost pathogenicity. Thermal asymmetric interlaced PCR was used to identify the transfer DNA (T-DNA) integration site in the mutant that was coded 2430, and a sequence of 476 bp was obtained. The flanking sequence of T-DNA was compared with the Colletotrichum genome by BLAST, and a sequence of 401 bp was found in Contig464 of the Colletotrichum genome. By predicting the function of the flanking sequence, we discovered that T-DNA insertion in the promoter region of the putative gene had 79% homology with the aspartate aminotransferase gene in Magnaporthe oryzae ().
机译:stylosanthes sp。是全世界热带地区最重要的牧草。猪膝花的炭疽病,主要是由Colletotrichum gloeosporioides引起的,是一种全球性的严重花病生产疾病。炭疽病分子发病机制研究进展甚微。在这项研究中,根癌农杆菌介导的转化被用于转化甜菜根炭疽菌菌株CH008。优化了炭疽链球菌遗传转化系统的主要因素如下:根癌农杆菌的AGL-1浓度(OD600)为0.8;炭疽菌分生孢子浓度为1×10 6 分生孢子/ mL;乙酰丁香酮浓度,100 mmol / L;诱导时间6小时;共培养温度25°C;和共培养时间,3 d。因此,每106个分生孢子转化效率提高到300-400个转化子。基于优化的系统,构建了包含4616个突变体的突变体文库,从中随机选择一些突变体进行分析。结果表明,突变体是可以稳定遗传的单拷贝。一些突变体的生长速率,孢子数量,孢子萌发率和,形成率与野生型菌株显着不同。然后,我们选择了最合适的方法来初步筛选和重新筛选每个突变体的致病性缺陷。我们选择了1230个转化子,获得了23个具有致病缺陷的菌株,即18个致病性降低的菌株和5个致病性丧失的菌株。使用热不对称交错PCR鉴定突变体中编码为2430的转移DNA(T-DNA)整合位点,并获得476 bp的序列。通过BLAST比较T-DNA的侧翼序列与炭疽菌基因组,在炭疽菌基因组的Contig464中发现401bp的序列。通过预测侧翼序列的功能,我们发现推定基因的启动子区域中的T-DNA插入与稻瘟病菌(Magnaporthe oryzae)中的天冬氨酸转氨酶基因有79%的同源性。

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