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Molecular Species Delimitation in the Racomitrium canescens Complex (Grimmiaceae) and Implications for DNA Barcoding of Species Complexes in Mosses

机译:芸苔属(Ramositrium canescens)复合体(Grimmiaceae)中的分子定界及其对青苔中复合物的DNA条形码的影响

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摘要

In bryophytes a morphological species concept is still most commonly employed, but delimitation of closely related species based on morphological characters is often difficult. Here we test morphological species circumscriptions in a species complex of the moss genus Racomitrium, the R. canescens complex, based on variable DNA sequence markers from the plastid (rps4-trnT-trnL region) and nuclear (nrITS) genomes. The extensive morphological variability within the complex has led to different opinions about the number of species and intraspecific taxa to be distinguished. Molecular phylogenetic reconstructions allowed to clearly distinguish all eight currently recognised species of the complex plus a ninth species that was inferred to belong to the complex in earlier molecular analyses. The taxonomic significance of intraspecific sequence variation is discussed. The present molecular data do not support the division of the R. canescens complex into two groups of species (subsections or sections). Most morphological characters, albeit being in part difficult to apply, are reliable for species identification in the R. canescens complex. However, misidentification of collections that were morphologically intermediate between species questioned the suitability of leaf shape as diagnostic character. Four partitions of the molecular markers (rps4-trnT, trnT-trnL, ITS1, ITS2) that could potentially be used for molecular species identification (DNA barcoding) performed almost equally well concerning amplification and sequencing success. Of these, ITS1 provided the highest species discrimination capacity and should be considered as a DNA barcoding marker for mosses, especially in complexes of closely related species. Molecular species identification should be complemented by redefining morphological characters, to develop a set of easy-to-use molecular and non-molecular identification tools for improving biodiversity assessments and ecological research including mosses.
机译:在苔藓植物中,形态物种的概念仍然是最常用的,但是基于形态特征对紧密相关物种进行划界通常很困难。在这里,我们根据来自质体(rps4-trnT-trnL区)和核(nrITS)基因组的可变DNA序列标记,在苔藓属Racomitrium的物种复合体(R. canescens复合体)中测试形态学物种的界限。复合物中广泛的形态变异性导致对物种数量和种内分类群的区别提出了不同的看法。分子系统发育重建可以清楚地区分复合物的所有八种目前公认的物种,以及在较早的分子分析中推断属于该复合物的第九种。讨论了种内序列变异的分类学意义。当前的分子数据不支持R. canescens复合体分为两组物种(小节或小节)。尽管部分难以应用,但大多数形态学特征对于R. canescens复合体中的物种鉴定是可靠的。但是,在形态上介于物种之间的集合的错误识别质疑了叶片形状是否适合作为诊断特征。关于扩增和测序成功,可以用于分子种类识别(DNA条形码)的分子标记的四个分区(rps4-trnT,trnT-trnL,ITS1,ITS2)几乎表现良好。其中,ITS1提供最高的物种识别能力,应被视为苔藓的DNA条形码标记,尤其是在紧密相关物种的复合物中。分子种类识别应辅以重新定义形态特征,以开发一套易于使用的分子和非分子识别工具,以改善生物多样性评估和包括苔藓在内的生态研究。

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