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A Modified Consumer Inkjet for Spatiotemporal Control of Gene Expression

机译:一种用于基因表达的时空控制的改良型消费者喷墨打印机

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摘要

This paper presents a low-cost inkjet dosing system capable of continuous, two-dimensional spatiotemporal regulation of gene expression via delivery of diffusible regulators to a custom-mounted gel culture of E. coli. A consumer-grade, inkjet printer was adapted for chemical printing; E. coli cultures were grown on 750 µm thick agar embedded in micro-wells machined into commercial compact discs. Spatio-temporal regulation of the lac operon was demonstrated via the printing of patterns of lactose and glucose directly into the cultures; X-Gal blue patterns were used for visual feedback. We demonstrate how the bistable nature of the lac operon's feedback, when perturbed by patterning lactose (inducer) and glucose (inhibitor), can lead to coordination of cell expression patterns across a field in ways that mimic motifs seen in developmental biology. Examples of this include sharp boundaries and the generation of traveling waves of mRNA expression. To our knowledge, this is the first demonstration of reaction-diffusion effects in the well-studied lac operon. A finite element reaction-diffusion model of the lac operon is also presented which predicts pattern formation with good fidelity.
机译:本文提出了一种低成本的喷墨定量给料系统,该系统能够通过将可扩散的调节剂输送到定制的大肠杆菌凝胶培养物中来连续,二维地时空调节基因表达。消费级喷墨打印机适用于化学打印。大肠杆菌培养物在750 µm厚的琼脂上生长,琼脂包埋在加工成商业光盘的微孔中。通过将乳糖和葡萄糖的图案直接印刷到培养物中,证明了lac操纵子的时空调控。 X-Gal蓝色图案用于视觉反馈。我们展示了当操纵乳糖(诱导剂)和葡萄糖(抑制剂)的模式时,紫胶操纵子反馈的双稳态本质如何以模仿发育生物学中的基序的方式导致整个领域的细胞表达模式协调。这样的例子包括尖锐的边界和mRNA表达的行波的产生。据我们所知,这是在经过充分研究的lac操纵子中反应扩散效应的首次证明。还提出了紫胶操纵子的有限元反应扩散模型,该模型预测了图案的保真度。

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