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Induction and differential expression of certain novel proteins in Anabaena L31 under UV-B radiation stress

机译:UV-B辐射胁迫下鱼腥藻L31中某些新蛋白的诱导和差异表达

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摘要

For examining how UV-B radiation alters the proteome of the N2-fixing cyanobacterium, Anabaena L31, we extracted proteins from cultures irradiated with UV-B + white light and controls (white light irradiated) and analyzed the proteins using two-dimensional gel electrophoresis and matrix-assisted laser desorption/ionization time of flight mass spectrometry (MALDI-TOF MS). Twenty one proteins, including two hypothetical proteins (HPs) were identified and placed in eight functional categories. However several of the proteins were housekeeping proteins involved in key metabolic processes such as carbon, amino acid biosynthesis and energy metabolism, certain proteins seem to have a role in stress (antioxidative enzymes), translation, cellular processes and reductases. Two novel HPs (all3797 and all4050) were characterized in detail. These two were over-expressed after UV-B irradiation and characterized as FAS 1 (all3797) and PRC barrel-like (all4050) proteins. Bioinformatics analysis revealed that the genes of both the HPs have promoter regions as well as transcription binding sites in their upstream region (UTR). Promoters present in all3797 genes suggest their crucial role against UV-B and certain other abiotic stresses. To our knowledge these novel proteins have not been previously reported in any Anabaena strains subjected to UV-B stress. Although we have focused our study on a limited number of proteins, results obtained shed light on the highly complicated but poorly studied aspect of UV-B radiation-mediated changes in the proteome and expression of proteins in cyanobacteria.
机译:为了检查UV-B辐射如何改变固定N2的蓝细菌Anabaena L31的蛋白质组,我们从用UV-B +白光照射的培养物和对照(照射白光)中提取了蛋白质,并使用二维凝胶电泳分析了蛋白质和基质辅助激光解吸/电离飞行时间质谱(MALDI-TOF MS)。鉴定了21种蛋白质,其中包括2种假设蛋白质(HPs),并将其划分为8个功能类别。但是,其中一些蛋白质是参与关键代谢过程(例如碳,氨基酸生物合成和能量代谢)的持家蛋白,某些蛋白质似乎在应激(抗氧化酶),翻译,细胞过程和还原酶中起作用。详细介绍了两种新型HP(all3797和all4050)。这两个在UV-B照射后均过表达,其特征是FAS 1(all3797)和PRC桶状(all4050)蛋白。生物信息学分析表明,两个HP的基因在其上游区域(UTR)中均具有启动子区域和转录结合位点。 all3797基因中存在的启动子表明它们对UV-B和某些其他非生物胁迫具有关键作用。据我们所知,这些新型蛋白质以前尚未在任何遭受UV-B胁迫的鱼腥藻菌株中报道。尽管我们的研究集中在有限数量的蛋白质上,但是获得的结果揭示了UV-B辐射介导的蛋白质组和蓝细菌中蛋白质表达的高度复杂但研究不足的方面。

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