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Characterization of Haemophilus Parasuis Serovar 2 CL120103 a Moderately Virulent Strain in China

机译:寄生血液血清血清血清血清菌2 CL120103中国中等毒性菌株

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摘要

Haemophilus parasuis is an important bacterium affecting pigs, causing Glässer’s disease. To further characterize this species, we determined the complete genomic sequence of H. parasuis {"type":"entrez-nucleotide","attrs":{"text":"CL120103","term_id":"40613738","term_text":"CL120103"}}CL120103, which was isolated from diseased pigs. The strain H. parasuis {"type":"entrez-nucleotide","attrs":{"text":"CL120103","term_id":"40613738","term_text":"CL120103"}}CL120103 was identified as serovar 2. The size of the largest scaffold is 2,326,318 bp and contains 145 large contigs, with the N50 contig being 20,573 bp in length. The complete genome of H. parasuis {"type":"entrez-nucleotide","attrs":{"text":"CL120103","term_id":"40613738","term_text":"CL120103"}}CL120103 is 2,305,354 bp in length with 39.97% GC content and contains 2227 protein-coding genes, 19 ribosomal rRNA operons and 60 tRNA genes. Sequence similarity of the genome of H. parasuis {"type":"entrez-nucleotide","attrs":{"text":"CL120103","term_id":"40613738","term_text":"CL120103"}}CL120103 to the previously sequenced genome of H. parasuis was up to 96% and query cover to 86%. Annotation of the genome of H. parasuis {"type":"entrez-nucleotide","attrs":{"text":"CL120103","term_id":"40613738","term_text":"CL120103"}}CL120103 identified a number of genes encoding potential virulence factors. These virulence factors are involved in metabolism, adhesion, secretion and LPS biosynthesis. These related genes pave the way to better understand mechanisms underlying metabolic capabilities. The comprehensive genetic and phylogenetic analysis shows that H. parasuis is closely related to Actinobacillus pleuropneumoniae and provides a foundation for future experimental confirmation of the virulence and pathogen-host interactions in H. parasuis.
机译:副猪嗜血杆菌是影响猪,造成格拉塞氏病的重要细菌。为了进一步确定这个物种,我们确定H的完整基因组序列{副猪“类型”:“Entrez的核苷酸”,“ATTRS”:{“文”:“CL120103”,“term_id”:“40613738”,“term_text “:” CL120103" }} CL120103,将其从病猪隔离。应变副猪嗜血杆菌{ “类型”: “的Entrez核苷酸”, “ATTRS”:{ “文本”: “CL120103”, “term_id”: “40613738”, “term_text”: “CL120103”}} CL120103被认定为血清型2,最大支架的大小是2326318 bp和含有145点大的重叠群,与N50重叠群在长度20573碱基对。 H.的完整基因组副猪嗜血杆菌{ “类型”: “的Entrez核苷酸”, “ATTRS”:{ “文本”: “CL120103”, “term_id”: “40613738”, “term_text”: “CL120103”}} CL120103是2305354 bp的长度与39.97%GC含量并含有2227个蛋白质编码基因,核糖体19个的rRNA操纵子和60个tRNA基因。 H的基因组的序列相似性副猪嗜血杆菌{ “类型”: “的Entrez核苷酸”, “ATTRS”:{ “文本”: “CL120103”, “term_id”: “40613738”, “term_text”: “CL120103”}} CL120103到副猪嗜血杆菌的先前测序基因组达96%和查询覆盖到86%。 H.基因组的注解副猪嗜血杆菌{ “类型”: “的Entrez核苷酸”, “ATTRS”:{ “文本”: “CL120103”, “term_id”: “40613738”, “term_text”: “CL120103”}} CL120103鉴定了许多潜在的编码毒力因子的基因。这些毒力因子参与代谢,粘附,分泌和LPS生物合成。这些相关基因铺平道路,以便更好地了解潜在的代谢功能机制的方式。综合遗传学和系统发育分析表明,副猪嗜血杆菌是密切相关的肺炎放线杆菌,并提供毒力的未来实验确认和病原体宿主相互作用的副猪嗜血杆菌奠定了基础。

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